Citrus sinensis (Valencia orange): 102610991
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Entry
102610991 CDS
T02983
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
102610991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102610991
03029 Mitochondrial biogenesis [BR:
cit03029
]
102610991
Membrane trafficking [BR:
cit04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102610991
Others
Specific organelles associated proteins
Auto phagosome
102610991
Mitochondrial biogenesis [BR:
cit03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102610991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ATG16
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
Cytochrom_D1
Beta-prop_RIG_1st
eIF2A
Beta-prop_Vps41
KNTC1_N
PEP5_VPS11_N
CCDC93_CC
DUF2383
Hormone_1
GCD14
Phlebovirus_NSM
Motif
Other DBs
NCBI-GeneID:
102610991
NCBI-ProteinID:
XP_006476932
UniProt:
A0A067FPT8
LinkDB
All DBs
Position
3:join(3862312..3862313,3862516..3862642,3862778..3862959,3863046..3863241,3863972..3864997)
Genome browser
AA seq
510 aa
AA seq
DB search
MSKEEIAREAIKHALKALRKRHLVEEGAHAPAIIALSRPIISQGSEWKEKADNLETELQQ
CYKAQSRLSEQLVVEVAESRSSKALLQEKESLITSLQEELTQIRDECSQLKTELEEKIKA
LELVVSENQQIRAQLEEMTMKAKNAEAENKMLVDRWMLQKMQDAERLNEANALYEDMIDR
LKASGLEKLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARL
ISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR
VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFS
MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNL
FDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE
HTAPVLSCSWSGLGKPLASADKNGVVCVWT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaggaaattgctagggaagctataaagcacgctctcaaggcgttacggaaa
cggcatttagtagaagaaggcgctcatgctcccgccattattgctctttcaaggccgatc
atttctcagggatccgaatggaaggagaaagcggataatctggaaacagagcttcagcaa
tgttacaaagctcaatctaggttatcagagcagcttgtggttgaagtagctgagtctaga
tcttctaaagctttattgcaagagaaagaatcactgattacttcactacaggaagaattg
acgcagataagggatgaatgttctcagttgaagacggaattggaagaaaagatcaaggcc
ttggaattagttgtgagcgagaaccagcaaatcagagcacagctagaagagatgactatg
aaagctaaaaatgctgaagctgaaaataaaatgttagttgatagatggatgttgcaaaag
atgcaggacgctgagcggctaaatgaggcaaatgcactttatgaagatatgattgatcgg
ctcaaggccagtgggttagagaaacttgctaaacagcaggtagatggtgtggttcgccga
agtgaagaaggtgctgagttctttgcggagtcaactgttccatctacatgcaaacataag
atcaatgcccatgaaggtggctgtgcatccatattgtttgaatacaattctgccagattg
attagtggtggacaggacaagtcaattaaattgtgggatacaaacactgggtcattaagc
agtaccctctatggttgccttggctcagttcttgatcttgctattacccatgataataga
tctgtcattgctgcaagtagctcaaacaacttgtatgtttgggatgtcaactcagggcgt
gtccgtcatactctcacaggtcacacagataaagtgtgtgctgtagatgtgagcaaaatt
tcaagccggcatgtcgtaagtgcagcttatgatcgtactttaaaagtgtgggatttgcat
aaaggttactgtgttaacacaatcatttttcacagcaactgtaatgctcttgccttcagt
atggatggacagaccatattttctggtcatattgatgggaatctgcgtttgtgggatatt
caaacaggaaagctacttagtgaagttgccgcacattcacttgctgcagttacatctatc
tctttgtcgcgaagtggaaacataatactaactagcgggcgagacaacttgcacaactta
tttgatatacggtctttagaagtttgtggctcactaagagcaactggaaacagagtggca
tctaattggagccgatcctgcataagtccggatgagagctatgttgctgctggctcagct
gatggatctgtatatatctggtcaatatctaaagctgatatagtgagaacgttgaaggag
cacacagctcccgtgctgagttgttcatggagtgggcttggaaaacctctggcctctgct
gacaagaatggagttgtttgtgtttggacgtga
DBGET
integrated database retrieval system
