Citrus sinensis (Valencia orange): 102611119
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Entry
102611119 CDS
T02983
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102611119
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102611119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
102611119
NCBI-ProteinID:
XP_006487462
LinkDB
All DBs
Position
8:join(9934918..9935538,9936942..9937019,9937966..9938769,9938871..9939143,9940956..9941246,9941328..9941422,9941869..9941980,9942573..9942710)
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AA seq
803 aa
AA seq
DB search
MKRTIMSDPNPYGTANGSSNKRSKQPAPPLVIPHGHVAFRLLCHSSRIGGVIGKSGNVIK
QLQQSTGARIRVEEPPTETPDRVVTVIAPPSIDTTICIQKKSSSSGVNSGANGNVVDGDN
LSKIEVSKAQEALIRVFERILEVASETEGVEMGVVSCRLLAETKQVGSVIGKGGKVVEKI
RKESGCKIRVLAENLSACAGPNDEIIELTVFCSEVSNEWVEWGQKIEAHTSQQIDGDVLA
VKKALIAVSRCLQDCPPSGKTRMTGSRFNEANLQETIHKPLEVAFQESICRPVETILHET
IRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEI
LRRPLEVFAPESSHRSSEAFSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSI
SYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAF
ISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLV
NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV
KDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFS
QPPLTQGMDHLGLSHSLDCPSSPKLWTAQTVTGVHLRGSSDVGRGWSQGLSHHKGGLELG
SGSKSAIVTNTTVEIIVPENVIGSVYGENGSNLLRLRQISGAKVIVHEPRLGSTDRIVVI
SGTPDETQAAQSLLQAFILTGPS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtacgataatgtccgacccgaacccgtatggcaccgcaaacggatcttccaac
aagcgttccaagcaaccggcaccgcctttagtaattcctcatggacacgtggccttccgt
ctgctctgccactcgtcccgcatcggcggcgtcatcgggaagtccggtaatgtcatcaag
cagctccagcagtcaaccggcgccaggatccgggtcgaagagcccccgaccgagacgccc
gaccgcgtcgtgacggtgatcgcgccgccgagtattgacacgacgatttgtattcagaag
aaaagcagcagtagtggtgtaaatagtggtgctaatgggaatgtcgtggacggtgataat
ttgagtaaaattgaagtttcgaaggcgcaggaggcattgattagagtttttgagaggata
ttggaggtggcgtcggagaccgagggagttgaaatgggggtggtgtcgtgtaggttgttg
gcagagacgaagcaagttggttcagtaattgggaaaggaggtaaagttgtggagaaaatt
aggaaagagagtggatgtaagattagggttttggctgagaatttgtctgcttgtgctggc
cccaacgatgagattattgagttgactgtattttgttcagaggtgtcaaatgaatgggtc
gaatggggccagaaaattgaagctcacacaagccagcagatcgatggggatgttttggct
gtaaaaaaggcacttattgctgtttctcgctgtctccaagattgtcccccaagtggcaag
actagaatgactggaagccgatttaatgaggcaaatttacaagaaactatacacaagcct
cttgaggtagccttccaagagtctatatgcagacctgttgagacaattctgcatgagacc
atacgcagacctgttgacacaattccgcatgagaccatacacaggcctcttgatacaatt
tcacacgagaccatacgcagatctcttgaagcagttccccatgatactatagccagacct
gttgaggcagttccccaagagattttatggagatctcttgagtcaggtcctcaagagatt
ttaaggagacctcttgaagtatttgctccagagagttcacatagatcttctgaggcattt
tccattgagactcaacatagactttttggggcagtttcccaggagattctacctgatctt
catgtagatattctttcacagaggaattctgtattaaccactgcaccaagcagctccatc
agttatgtgtcagcagttcgtcctttgtcattagaatctgaccgggtcgccaccctggat
gcaagaacacaacagcaggaagtaagttttagaattctttgttctaatgataaggtcgga
gccgttattgggaagggaggcaccatcatcagggctcttcagagcgaagcaggtgctttt
ataagtgttggagctaccatgccggagtgtgatgaacggttaatcactgttactgcatca
gagggtccagaatcacggtattcgcctgcacaaaaagctgttgtccttgttttctctaga
ttaatagagggtactagtgaaaaggggttagatttcagctcaaataaggggttactggta
aatgctcggcttgtagttgcatcaaatcaagttggttgtttgttgggaaaaggaggcaca
ataatctcagaaatgcggaaagtgactggtactagcataaggataatcagtgatcagctc
cttaagtgtatctcagagaatgatagagtggtgcagatttcaggagagttctcaaaggtg
aaagatgcagtttataatgtaactggtagactgcgagataatcatttttctggcacattg
aacactgccagaacaaggagcacttcctctgtattaactgagaccagtccttatagtaga
ttgaaggaccctgcttcttttggggttcactcgtcagttgctgtttctcatgattttagc
caacctcccttaactcagggtatggatcatcttggactttcccatagtctagattgtcct
tcttcaccaaaattatggacagcacagacggtaactggagttcatctgaggggcagctca
gatgttggaagaggttggagtcaaggtctgagtcatcataaaggtggattggagcttggc
agtggaagcaaatctgccattgtaacaaatacaactgtagagattatagttcctgaaaat
gtgattggctctgtttatggggagaatggtagtaatctgcttcgtctgagacagatttca
ggtgcaaaggtcattgtgcatgaacctcgtctgggatcaactgatagaatcgttgtgata
tctgggacaccggatgaaacccaggccgctcagagcctcctccaagcattcatcctcact
gggccgtcatga
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