KEGG   Citrus sinensis (Valencia orange): 102611224
Entry
102611224         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102611224 isoform X2
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102611224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102611224
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     102611224
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 102611224
NCBI-ProteinID: XP_024956664
LinkDB
Position
4:join(26773626..26773660,26774323..26774360,26775223..26775329,26775409..26775460,26775570..26775654,26776310..26776400,26776762..26776794,26776951..26777018,26777123..26777185,26777395..26777450,26777532..26777605,26777689..26777781,26777875..26777976,26778140..26778220,26778303..26778394,26778509..26778524,26778730..26778843,26778929..26779030)
AA seq 433 aa
MITFTETSIWIRWLCNSLTLKSFRGLSHLVYPGAVHSRFEHSLGVYWLAGTAVQTLKDYQ
GLELDIDDIDIQTVKLAGLLHDVGHGPFSHMFEREFLPRVLSGSNWSHEDMSLKMIDYIV
DQHYIDIDSGRLDRVKEMIVTSHASQKSAKEKQFLYDIVANGRNGIDVDKFDYIVRDSRA
CGLGCNFQFERLMETMRVMGDEICYRAKDYLTVYKLFSARADLHRTVYTHAKVKAIELML
VDALLEANEHLGISSSIQQPAEFWKLDDTIINAILADPRPELKKARDIILRVRRRQLYQF
CNEYSVPKAKQEHFKGINAQDIVCSQKAGEVTLKEEDVIVSIVKIDLTRGKKNPLESTNF
YQDYCSDVKFLIDKEERISHLLPTFCQDMIVRVYAKEPHLVEAVSDAFENFQMKTYGEKT
QVHSTPEKKKRRR
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgataacgttcacggaaacatctatctggatccgctggctttgcaattcattgacactg
aagagtttcagaggtttatcacacttggtttacccaggagctgtacattctcgttttgag
cattcactaggggtttattggttagctggtacagctgttcaaacacttaaagattaccag
ggcctagagcttgatattgatgacattgatatacagacggtgaaacttgctggactgctg
catgatgttggccatgggccattcagccatatgtttgagagggagtttcttcctcgggtt
cttagtggctccaattggtctcatgaagacatgtccctgaagatgatagactacattgtt
gatcagcactatattgacattgattcaggaaggcttgatagggtgaaggaaatgatagtt
actagccatgcttcacagaaaagtgcgaaggaaaaacagtttctatatgacattgttgca
aatggtcggaatggaatagatgtagacaagtttgattacattgttcgtgattcccgcgct
tgtggtctaggctgcaattttcagttcgaaaggttaatggaaactatgcgggtaatgggt
gatgagatatgttaccgagctaaggattatcttacggtctacaagttgttttctgcacgt
gctgatttgcatcgaacagtctatacacatgcaaaagtgaaggcaatagaacttatgctt
gtagatgcactgttagaagcaaacgagcatcttggaatttcgtcctcaattcaacagcca
gcagaattttggaagttagatgatacaataatcaatgccattttagctgatccccgtcca
gaactgaagaaagcaagagatataattcttcgagttcgaagaaggcagctataccagttc
tgcaatgagtattcagttccaaaggcaaagcaagagcactttaaaggcataaatgcacaa
gatattgtttgttcccagaaagctggtgaggtcacactaaaagaagaagatgttattgtg
agcattgttaagattgatttgactcgtggaaagaaaaaccctcttgaaagcacgaatttt
tatcaggattattgttctgatgtgaaattcctaatcgacaaagaggagcgcatcagtcat
ttgctgcccacattctgtcaagacatgattgtgagggtgtacgccaaggagccccatttg
gtggaagcagtttctgatgcctttgagaattttcagatgaagacatatggtgagaaaacg
caggtgcattcaactcctgagaagaagaaacgccgaagataa

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