Citrus sinensis (Valencia orange): 102611325
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Entry
102611325 CDS
T02983
Name
(RefSeq) nuclear transcription factor Y subunit A-3 isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102611325
Transcription factors [BR:
cit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
102611325
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
102611325
NCBI-ProteinID:
XP_006465957
LinkDB
All DBs
Position
7:complement(join(7145129..7145473,7145596..7145769,7146716..7146790,7146874..7146986,7147333..7147636))
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AA seq
336 aa
AA seq
DB search
MPNLFSKDSGISSACSASMIGVSGPLWGSSSESVVQQSSMSGCLSLKMAVPRLQFANTKQ
LSFQFQDQESSSTQSTGQSCSKEACVKDDNPSGQSVVSAPPGFNGIHVKPVGGHSKLASS
MGPHDFVFTPPHVDYNQSVAPFQLHYAEPYFSGLLSPFLPPQAMQIHHPQMMGMAPARVP
LPLELAEDEPIYVNAKQYRAILRRRQYRAKLEAQNKLVKGRKPYLHESRHAHAMNRARGS
GGRFLNTKKVPESKRNLTNNELDMSESEAHRENYKDGGSTTSCSDITSASNSEDIFQQPE
FGFSGYSSIGSRSMQGCSATMNGDGNIHRFLSSVDG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacctgttcagcaaagattctggtataagctctgcctgctcagcatcaatgatt
ggtgttagtggcccgttgtgggggagttcaagtgaatcggttgtccaacaatcatccatg
tctgggtgcttaagcttgaagatggcagttcctcggctacaatttgctaacactaaacaa
ttgagctttcaatttcaagaccaggaatcatcctcaactcagtcaactggtcaatcttgc
tccaaagaggcttgtgtcaaagatgacaaccctagcgggcaaagcgtagtatcagcacca
ccaggatttaatggaattcacgtgaagcctgtcggaggtcactctaaactagcctcatca
atgggtcctcatgattttgtcttcactcctccacatgttgattacaaccagtcagttgct
ccatttcaactccattatgctgaaccatacttcagtggcttattatcaccattccttccc
ccgcaggctatgcagattcatcatccccaaatgatggggatggctcctgctcgagtgccg
ctgcctcttgaacttgctgaagatgagcccatttacgtcaatgctaaacaatatcgagcg
attctcaggcgcagacagtatcgtgccaagctcgaagctcaaaataaacttgtcaaaggc
cgcaagccatatcttcacgagtcccgccatgctcatgcaatgaacagggcaagaggatct
ggcgggcgttttctcaacacaaagaaggtcccagaatccaagcgtaatctaacaaacaat
gaactggatatgtcagaatctgaagctcatcgcgagaactacaaagatggtggttccacc
acgtcttgttctgacatcacaagtgcctccaacagtgaagacatattccagcagccggag
tttgggttctctggctactcttctattggcagtcgaagcatgcaaggttgttcagctact
atgaatggtgatggcaacattcatcgtttcctgtcctctgtcgatggatga
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