KEGG   Citrus sinensis (Valencia orange): 102611539
Entry
102611539         CDS       T02983                                 
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102611539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102611539
   03110 Chaperones and folding catalysts [BR:cit03110]
    102611539
   03029 Mitochondrial biogenesis [BR:cit03029]
    102611539
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102611539
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     102611539
Messenger RNA biogenesis [BR:cit03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     102611539
Chaperones and folding catalysts [BR:cit03110]
 Heat shock proteins
  HSP60 / Chaperonin
   102611539
Mitochondrial biogenesis [BR:cit03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    102611539
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102611539
  Exosomal proteins of other body fluids (saliva and urine)
   102611539
  Exosomal proteins of breast cancer cells
   102611539
  Exosomal proteins of colorectal cancer cells
   102611539
  Exosomal proteins of bladder cancer cells
   102611539
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 102611539
NCBI-ProteinID: XP_006468488
LinkDB
Position
2:complement(join(26812285..26812572,26812766..26812966,26813209..26813459,26813996..26814302,26814680..26814825,26814916..26815123,26815234..26815355,26815740..26815929,26816033..26816086))
AA seq 588 aa
MSVSFSSPSVVSPVYLFTNNFGGNKVKRVSGKCLWRNQSRKMVAVVRAGPKKILFGKESR
EALQAGIDKLADAVSVTLGPKGRNVILSESDKLKVINDGVTIARAIELSDTIENAGAMLM
QEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQK
SFPVTGRDDIKAVASISAGNDEFIGNLIADAIIKIGADGVILIESSSSFETSIIVEEGMK
IDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDI
SSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATS
DQLGIARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSG
GVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEGIVPGGGATYVHLLEHIPIIKNSME
DPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNAMTGRYEDLLSAG
VADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPGINT
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgtccgtttccttctcctcaccttcagtcgtctctccagtatatctcttcactaataat
tttggtgggaataaagtcaaaagggtaagtggaaaatgcttatggagaaaccagtccagg
aaaatggtggcggtggtgagggcgggaccaaagaagatattgtttggcaaagaaagcaga
gaagccttacaagctgggattgacaagcttgctgatgctgtttctgtcactttaggccct
aaaggacggaatgttattctttctgagtcagacaaactaaaagtaattaatgatggcgtg
acaattgctcgggccattgagctttcagatacaattgaaaatgctggagcaatgctgatg
caagaggttgctagtaaaatgaatgatctggctggtgatggcaccacaactgcagtaata
ttggctcgagaaatgatcaaatctgggatgttgtcagtttcttttggggctaaccctgtt
gctttgaagaaaggaatgcataagactgtgaaggaattagtcaaggttctgaagcagaaa
agttttcctgtgacagggagggatgacataaaagctgtggcttcaatatctgctggaaat
gatgagttcattggtaacttgattgctgatgctatcatcaagattggcgcagatggtgta
attcttattgaatcatcctcttcatttgaaacctcaattatagttgaagaaggaatgaag
attgacaagggttatttatcgccccagttcattacaaaccaggaaaaatctcttgtggag
tttgacaatgctaaagtgctgataactgatcaaaaaatttcaactgtgaaagaaatagtt
cctttactagaaaagaccacccaattgagtgtcccattgctaattattgctgaggatatt
tcaagtcaagtactggaaacactagtgatgaacaaaattcgaggtctgcttaatgttgct
gttgtcaagtgtccgggatttggagatggaaaaaaagctttattgcaagatattgccctt
atgacaggtgctgattttctctcaggagaattgggtctgacccttgcaggtgctacctca
gatcagcttggcattgcacgaaaagtaaccgtaaagagtaattcaacaaccatagttgca
gacccttatactaaagctgaaattcaggctagaattatgcagataaagaaggatctagct
gcaacagataatgcatatttgtcaagaaagctctcagaaagaattgctaaactctctgga
ggtgtggctgtaattaaggtaggagcacacactgaggtggaacttgaagatcgaaaactc
agaattgaggatgcaaagaacgcaacttttgctgccatggatgaagggatagttcctggt
ggtggtgccacatacgtacatctattagagcatataccaattataaagaattcaatggaa
gatccagatgagcagattggtgctgatattgtagcgaaggcactcattgtacctgccata
tctattgcaactaatgcgggggttgatggaacaatagttgtggagaagactcgaacttct
gattggcgatttgggtacaatgcaatgacaggaagatatgaagatctcctgagtgccgga
gtggctgacccttgtcgggtagcaaggtgtgcacttcaaaatgcagtctccattgccgcg
gtagtcttgacaactgaagctgtattggcagataaaataaagcagccgaagccagctgtt
cctcaagttccagggataaatacttga

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