Citrus sinensis (Valencia orange): 102611569
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Entry
102611569 CDS
T02983
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102611569
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102611569
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Pectate_lyase_4
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
102611569
NCBI-ProteinID:
XP_052294647
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All DBs
Position
3:complement(join(33208458..33208703,33208799..33209024,33209248..33209537,33209864..33210295))
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AA seq
397 aa
AA seq
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MAKLAVSCILFIFFINTLFQSASAAYNVINFGAKPDGKSDDTQAFLRAWSSACYSNSPAT
LHVPRGLFLVKSISFNGPCRHRIVFQIDGTIIAPSSYWSLGNSGFWILFYKVNRLSIHGG
TIDATGAGYWACRKSGKSCPPPTRSISFVGASNIVVSGLTSINSRFFHIAIDECVNIMLR
KLKINAPSWSPNTDGIHIQSSSGITISNSAIMTGDDCISVGPGTKNLWIERIACGPGHGI
SIGSLGAYAAEDGAKNVTVTDSIFTGTQNGVRIKTWARPSNGFARNIRFRNIIMTNVFNP
IIIDQNYCPDNHCPHQSSGMTISGVTYRNIEGTSATPVAINFGCSSSKPCTGIKLQGIVS
QDEYFAQLIRVALRQFCRLLLSKPRASRTREESNGAE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctagcagtttcatgcatactcttcatcttcttcattaataccctcttccaa
tcagcaagtgcagcctataatgtgatcaattttggtgcaaaaccagacggaaaatctgac
gacacacaggcgttccttcgggcgtggtcatcggcatgctactccaatagtccggccacg
ctgcatgttcctcggggacttttcttggtaaaatcgatatcctttaatggaccatgtagg
cacaggattgtgtttcagattgatggaacaattatcgctccatcaagttattggtctcta
ggcaattcgggattttggattttgttttacaaggtcaatagattgagtatacatggagga
accattgatgcaacaggagctggctattgggcttgcaggaaatctggaaaaagttgccct
cctccaacaaggtcaatatcatttgtgggggctagtaatattgttgtcagcggattaaca
tccatcaacagcagattttttcatatagctattgacgaatgcgttaatattatgcttcga
aagttgaaaattaatgccccaagctggagtccaaacactgatggcatccacatccaatca
tcctcaggcattacaattagcaacagtgccattatgactggagatgattgcatctcagtc
ggtcctggcactaaaaacttatggattgaacgcattgcctgtggccctggccacggaatc
agcattggcagccttggggcctatgctgctgaagatggtgcaaaaaatgtgacagtaaca
gattcaattttcactggaactcaaaatggtgtacggatcaaaacatgggcgagacccagc
aatggatttgcaagaaacattagatttcgaaatattattatgacaaacgtctttaatcct
atcatcatcgatcaaaattattgccctgacaatcattgtcctcatcagagctctggcatg
acaatcagtggagtgacatacagaaatatagaaggaacatcagcaacaccagtggcaata
aattttggttgcagttcaagcaagccgtgcacaggaatcaaattacagggcatagtgtca
caggatgagtattttgcacagctaatccgtgtggcacttagacaattttgccgattgttg
ctaagtaagcctagagcttctcgaactagagaagagagcaatggagccgaataa
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