Citrus sinensis (Valencia orange): 102611580
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Entry
102611580 CDS
T02983
Name
(RefSeq) protein TRI1 isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102611580
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
102611580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
GP46
DARPP-32
Rab15_effector
Motif
Other DBs
NCBI-GeneID:
102611580
NCBI-ProteinID:
XP_052288858
LinkDB
All DBs
Position
8:complement(join(3681730..3681779,3682184..3682228,3682562..3682736,3682886..3683000,3683963..3684098,3684802..3684976,3685058..3685175,3685445..3685734))
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AA seq
367 aa
AA seq
DB search
MVSDSDLVTRLRDLLRNSDLDTATAGSVRRLLEEDFKVDLSDRKAFVSEQIDIFLQTLEK
EREEIEDDGNDAVEANADDKEEEEEEEEEESERKREKSIKVGREVKRRGGGGFNKICSLS
TQLQKVVGAPELARTEVVKKLWVYIKENKLQDPTNKRKILCDESLQALFGVNSIDMFKMN
RALSKHIWPLGAEDENVKQKIGVEDFKNSEEEEEKEQEQEHEEEEEEEETSIEQQSKENR
STKADKDVKKRRGGFTKLCSLSPDLQTFVGVSELARTEVVKKLWAYIREKNLQDPKNRQN
IICDEALQVLFRVNSINMFQMNKALTRHIWPLDEADAKSKEKEKQCEQVEEGTDEPKHKA
KRQKKEV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggaccttgtgacccggcttcgagacctcctccggaactcggacctg
gacacggccaccgccggcagtgtacggaggctactagaggaagattttaaggtggactta
tcggaccgaaaggcttttgtcagtgaacaaattgacatatttttacaaaccctagagaaa
gaacgagaagaaattgaggatgatggaaacgacgccgttgaagcaaatgcagatgataag
gaggaagaagaagaagaagaagaggaagaaagtgaaagaaaaagagaaaagtcaatcaaa
gttggtagagaagtcaagaggagaggaggtggtggctttaacaaaatatgtagtctttct
acacaacttcaaaaagttgttggagcccctgaattggcaagaaccgaggttgtgaagaaa
ttgtgggtatatatcaaagaaaataaattgcaggatccaactaataagcgaaaaatatta
tgtgacgagtcattgcaagctctctttggtgtcaactctattgatatgttcaaaatgaat
agggccctgtcaaagcacatttggcctctcggtgcagaagatgaaaatgtaaagcagaag
ataggagttgaagatttcaagaattcggaggaagaagaagaaaaggaacaggaacaggaa
catgaagaggaagaggaagaagaggaaacgagtattgaacagcaaagcaaggaaaataga
tcaactaaggcggataaagatgtcaagaaaaggagaggtggctttaccaaactgtgtagt
ctttctccggatcttcagacatttgtcggcgtatctgaattggccagaacagaggttgtc
aagaaactctgggcctatatccgagagaagaatttgcaagatccaaagaataggcaaaat
ataatatgtgatgaggccttacaggttcttttccgtgttaattctatcaacatgtttcaa
atgaataaagccctgaccagacacatatggccattggatgaggcagatgccaaatctaaa
gaaaaggaaaagcagtgcgagcaggtggaagaaggtacagatgagccgaaacataaagct
aaacgacagaagaaagaagtttga
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