KEGG   Citrus sinensis (Valencia orange): 102611754
Entry
102611754         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102611754 isoform X1
  KO
K19025  AP-5 complex subunit zeta-1
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    102611754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102611754
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     102611754
SSDB
Motif
Pfam: SPG48 TPR_AP5Z1_C Vps35
Other DBs
NCBI-GeneID: 102611754
NCBI-ProteinID: XP_006493939
LinkDB
Position
9:complement(join(26381030..26381079,26381305..26381515,26381677..26381833,26381931..26382058,26382133..26382180,26382818..26382889,26383251..26383327,26383482..26383629,26383842..26383925,26384094..26384240,26384329..26384420,26385072..26385160,26385550..26385593,26385936..26386032,26386563..26386654,26387213..26387353,26387449..26387559))
AA seq 595 aa
MSDRDRGWDFHLRNLSNSARDSSVATDPAADPSVLHSVKKLYNLCKEEKNDDLVARVYPL
INKLFQRSVASLSQSRTSNGLLLLDILQFFLDFGEVVLHDADPSIRTFFRSCLSREFADP
VVAEATLDFINVNKKKLLSSFPTLLPQFFPLLLKLIAWNGEKLEKAFLKVFPAVMSSASF
LPLLSALVDLPILVVALEKVEKSSGSLIGSSIATIQKSTAPEMLLALMDEAYTGSTIADG
GGDSESEDSNTIDVADPLFLELLKDENDGLAFYVFICHLSLVIYLLWIHLLQPFLITTCE
RHWASPGMAATLQAAINAPPSDRLKQILSMTPRLLDVYFAIALRDVNDSLICALIPQLMA
RNATLFLDKNFSYEVRKRLLEFLLAAFQRSPDFIALLKKPIMDRLAEAYDSPAKMELALQ
LCWAIGEHGGGGASHKDAARELFENLELLLYENLSSSVGLRQEASVGPDSENYRKSSQSR
LLCFVVTAIAKLATYHRELLPRARVSLGKVARSRISDARVWKRARDYLGLMNDPAICLSI
LGPSRPSQHDIQKPGTVNWSEGGRKMVAHFPFYILGDQKGPPFHDFTISDILPRK
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtccgatcgagacagaggctgggatttccatctgcgaaacttatcgaacagcgctaga
gactccagtgtcgccaccgaccccgccgccgatccttccgttctccactctgttaagaag
ttatacaacctctgtaaggaggagaaaaacgatgacctcgtggcaagagtttatccgctt
attaacaagctatttcaacgatccgttgcttcgctttcgcaatctcgcacctccaatggc
cttctcttgctggatattcttcagttcttccttgattttggggaagtggttctacatgat
gctgatccaagtataaggacgtttttccgttcatgtttgagccgtgagtttgcagatcct
gttgttgcagaagcaacccttgattttataaatgtgaacaagaaaaaacttttgagttct
ttccctaccttgttgccacagttctttcctctgttgctaaagctaatagcatggaatgga
gagaaattagaaaaagcattcctgaaggtttttccagctgtgatgtcatctgcatcattt
cttcctctactttcagctctagtggatttgccaattttagttgtggccttggagaaggta
gaaaagagttcaggatcattaattggaagcagcatagctacaatccagaagagtacggcc
cctgagatgctgcttgcacttatggatgaagcctatactggttcaaccatagcagatgga
gggggagactctgaatcagaggatagtaatacaatagatgtagctgatcctctgtttctt
gaactgctgaaggatgaaaatgatggccttgctttttatgtattcatctgtcatctcagt
ttggttatttaccttctctggatccacctgttgcagcctttcttaattacaacttgtgag
cgacactgggcttctcctggaatggctgcaacattacaagctgcaataaatgcccctccg
tctgataggttgaaacagatattgagtatgacgccccggctcctggacgtatattttgct
atagcattgcgagatgtcaatgattccttaatctgtgcattgattccccagcttatggca
agaaatgctactctgttccttgacaaaaacttttcttacgaggttcgtaaaaggctctta
gaattcttgcttgctgcatttcagcgatctccagattttattgcgcttttgaagaagcct
ataatggacagacttgcagaagcctatgatagccctgctaagatggagttggctctacaa
ttgtgttgggccattggggagcacggcggaggtggtgcatctcacaaagatgcagctcgt
gagctctttgaaaatttagagctacttttgtatgaaaacctttcatctagtgttggctta
aggcaggaagcatctgtgggccctgatagtgaaaactacaggaagtcatcacagtcgagg
cttttatgttttgttgttacagctattgcaaagcttgccacatatcaccgtgaattatta
ccaagggcacgtgtttccttgggcaaggtagctcgatctcggatctcagatgcaagggta
tggaagcgtgctcgtgattacttgggtttaatgaatgaccctgcaatttgtttgtctatt
ctggggccatcaagaccttcacaacatgacatccagaaaccaggaactgtcaactggagt
gaaggcggaagaaagatggttgcacattttccattttacatccttggagaccaaaaaggt
ccacctttccatgattttacaatttcagatattcttccaagaaaataa

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