KEGG   Citrus sinensis (Valencia orange): 102611813
Entry
102611813         CDS       T02983                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102611813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102611813
   03400 DNA repair and recombination proteins [BR:cit03400]
    102611813
Spliceosome [BR:cit03041]
 Complex B
  Other components
   Prp19 complex
    102611813
 Complex C
   Prp19-CDC5 complex
    102611813
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102611813
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 102611813
NCBI-ProteinID: XP_006487719
LinkDB
Position
8:complement(join(20590803..20591603,20591854..20592135,20593392..20595113,20595652..20595828))
AA seq 993 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRRGIDYNAEIPFEKKPPPGFFDVTDEDRPVELVSFPT
TIEELEGKRRVDIEAQLRRQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLIAGNEELTEGSGATRALLANYAQTPQRGMTPSRTPQRTPAG
KGDAVMMEAENLARMRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPILTPSATPGG
MGSTPRIGMTPSRDGSSFGVTPKGTPIRDELHINEDLDMHDSAKLEQRRQAELRRNLRLG
LTSLPQPTNEYQIVVQPPAEEDEEPEEKIEEDMSDRLAREKAEEEARQQALLRKRSKVLQ
RELPRPPVASLELIRNSLLRADGDKSSFVPPTSIEQADEIIRKELLKLLEHDNAKYPLDE
KVAKKKKGNKRSANGPTAPIPVIEDFEEDELQEANNLIKEEAQYLRVAMGHENESLDDFV
EAHNTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQGEFEIVKKRMDDDKEKALQLEKTVK
VYTQGYEKRAENLRAQIHSTVKQMETAGTELECFLALQKQEQLAASSRINGLWEDVQKQK
ELERTLQQRYGDLSTELERISRLIAERREQAQKAAEEKRALELAEAQATANQAAEQVSEA
SESLPSEELGSSMAVDPPCDETTGQQINTAHMDIDSGKEHTAAVTDGCLSDTVPSFEEGK
LPSHGVAVDTTGSSEVVKEDPAVDQQNVVEASNRNDALTKQESIAQETAKDDGFADESAN
KVHGAEFDKANLAAKELEAKDNLPLLNGDSTDK
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaaaggaggcgtgtggaagaacacggaagatgagatcctcaaagcc
gccgttatgaaatacggcaagaatcagtgggcccgtatctcctctctcctcgttcgtaaa
tccgccaagcagtgcaaagctcgttggtacgagtggctcgatccctccatcaaaaaaacc
gaatggacgagagaggaggatgagaaattgcttcatcttgccaagcttatgccaacccag
tggagaacaattgctccaattgttggccgtactccctcacagtgccttgagaggtatgag
aaactccttgatgctgcctgtgccaaggatgagaactatgaaccaggtgatgatcctcga
aaattgcgtcctggggagattgatccaaaccctgaatcaaagcctgcacgtccagatcct
gttgatatggatgaagatgagaaggaaatgctttctgaagcacgagctcgtttagccaac
actcgtggcaaaaaggcaaaaagaaaggccagggagaaacagcttgaagaagccaggagg
cttgcttctttgcagaaaaggagagaacttaaagctgctggaattgatactaggcaaagg
aagagaaaaaggaggggtatcgactataatgcagaaatcccctttgagaagaaacctcct
ccgggtttttttgatgttactgatgaagataggcctgtggaactagttagctttccaaca
accattgaagagcttgaaggcaagagaagagttgatatagaagctcagctaagaagacaa
gatattgcaaagaataaaattgcacagaggcaggatgctccgtcggctatattgcaggca
aacaagctgaatgatccggaaacggttaggaagaggtcaaaactcatgcttcctgctcct
cagatatcagaccatgagttggaggaaattgcaaaaatgggttatgctagtgatcttatt
gcagggaatgaggaactgacggaaggaagtggtgcaactcgtgctcttcttgcaaattat
gctcagacaccacagcgtggaatgacaccatcacgaactccacagagaaccccagctggt
aagggtgatgctgttatgatggaagctgaaaacctggcccggatgagagagtctcagaca
cccttgttggggggtgagaacccagagttgcacccttcagatttttcgggggtcactcct
aaaaagagggaaattcaaacaccaaatccaatactgactccctcagcaacacctggtggc
atgggaagtactccaagaattgggatgacaccatcaagggatggctcttctttcggtgtg
accccaaaaggaacacccatcagggatgagctccacataaatgaagacttggacatgcat
gatagtgccaaacttgaacaacgaagacaagctgaattaagaagaaacttgcgtttaggt
ctaactagtcttccgcagcccacgaatgaataccaaattgttgtccaaccacccgcagaa
gaagatgaagagccagaggagaagattgaagaagacatgtctgataggctagccagggaa
aaggccgaggaagaagctaggcagcaggcattgcttaggaagagatcaaaagtgctgcag
agggagcttcctagaccccctgttgcttcattggagctaattagaaattctttgcttagg
gctgatggagacaagagttccttcgttcctcctacttctattgagcaggctgacgaaatt
ataagaaaggagctgctgaaattgctggaacatgataatgcaaaatacccacttgatgaa
aaagttgcgaagaaaaagaagggaaacaagcggtctgctaatggacccactgctcccatt
cctgtaattgaggattttgaagaagatgagctgcaagaggcaaataatttgataaaggaa
gaggctcaatatcttcgtgtagcaatggggcacgaaaatgaatcccttgatgattttgtg
gaagcacacaatacttgtctgaatgatctcatgtacttccctacccgtaatgcttatggt
ctttcaagtgtcgctggaaacatggaaaaacttgcagccttgcaaggtgaatttgagatt
gtgaaaaagagaatggatgatgataaggagaaggctttacaacttgagaaaacggtcaaa
gtttacacacaaggttatgagaaacgagctgaaaacctgcgggctcaaattcactcaact
gtcaagcagatggaaacagctggaacagagctggagtgcttcctggctttgcagaagcaa
gaacaattagcagcatcgagccgaataaatggtctgtgggaggatgttcagaagcaaaag
gagcttgagcgaacattacagcagcgctatggagatctctccactgagctggaaagaata
agccgtctcatagctgaaagaagagaacaggcacaaaaagctgccgaagaaaagcgtgct
cttgaattggctgaggctcaagccacagcaaatcaagctgctgagcaagtttcagaagct
tccgagtctttaccctcagaggaacttgggagttcaatggcagtggatccaccttgtgat
gaaactacaggccaacaaataaatactgcccacatggatattgattcagggaaagaacat
acagcagctgtcacagatggatgcttatctgacacggtaccttcttttgaagagggaaag
ttacccagtcatggggtggctgttgataccacaggcagttcagaggttgtcaaggaggat
ccagctgttgatcagcagaatgtggtggaagcgagtaaccgaaatgatgccttaaccaaa
caagagagcattgcccaagaaaccgcaaaagatgatggttttgctgatgagagtgcaaac
aaagttcatggtgctgaatttgacaaggcaaatttagccgcaaaagagttggaagccaag
gacaatctgcctctcttaaatggagattccactgacaaataa

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