Citrus sinensis (Valencia orange): 102612007
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Entry
102612007 CDS
T02983
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102612007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102612007
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102612007
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
U-box type E3
102612007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
MCAfunc
Arm_2
zf-C3HC4_2
HEAT_EZ
KAP
zf-C3HC4
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
102612007
NCBI-ProteinID:
XP_006488304
UniProt:
A0A067FZR7
LinkDB
All DBs
Position
8:complement(join(28842752..28843894,28844381..28844836,28845178..28845294,28847804..28848073))
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AA seq
661 aa
AA seq
DB search
MEDEKGVLVQSLIDTVNEISTISDYRGTVKKQYCNLARRLKLLTPMFEEIKESKEAIPEE
TSKALVSLKEALASAKELLRFGSEGSKIYLVLERGEIMTKFYEVTAQLEQALSAISYENL
DISDEVKEQVELVLSQFRRAKGRVDAPDVELYEELLSLYNKNNDVTPDPAVLRGLAEKLQ
LMGIADLTQESLALHEMVASTGGDPGETIEKMSMLLKKIKDFVQTENPNLDAPLKEKNPG
PSQGGQASSDRNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCP
KTQQTLTSTAVTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKTSSACSPAERTKIEILL
CKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTAL
LNLSICEDNKGSIVSSGAVPSIVHVLRIGSMEARENAAATLFSLSVIDENKVTIGASGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPGGGMVDEAL
AILAILSSHPEGKAAIGAAEAVPVLVEVIGNGSPRNRENAAAVLVHLCAGDQQYLAEAKE
LGVMGPLVDLAQNGTDRGKRKAAQLLERMSRFIEQQKQAQVQTESQSQIQEARLPSNAAD
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaaaaggagtgctcgtgcagagcttgatcgacacagtgaacgagatatcg
acgatttcggattacagaggtacggtcaagaagcagtactgcaacttggcgaggagattg
aagctgttgacgccaatgtttgaggaaattaaagaaagtaaagaagcgattccagaagag
acttctaaagctttggtttcgttgaaggaggcgttagcttcggctaaggagttgcttaga
tttggcagcgaaggcagcaagatttacctggttttagagaggggtgaaattatgacaaaa
ttctatgaggttacagcgcagttggaacaagctttgagtgcaatttcttatgaaaacctc
gacatatcagatgaagtcaaggaacaggttgagcttgttctttctcagttcagaagagcc
aaaggaagagttgatgcacctgatgttgagctgtacgaggaacttttgtccctctataac
aagaacaatgatgtaacaccagatccagctgtcctaaggggattggctgagaagttacaa
ctgatgggaatagctgatctaacacaagagtcactggcgttgcatgagatggttgcttcc
actgggggagatcctggggagaccattgagaagatgtcaatgttgttgaagaagattaag
gattttgtgcaaacagagaaccctaacttggatgctcctttgaaagaaaagaatcctggt
ccaagtcagggtggtcaagcttccagcgataggaatcacaaggctccagttataccagat
gatttccgctgtccaatatcactggagttgatgaaggatcctgtcattgtttcaacagga
cagacctatgagcgttcctgcattgaaaagtggctggaagcagggcataggacatgtcca
aagacacaacagactctcactagtactgcagttacacccaattatgtccttcgtagtctc
attgcccagtggtgtgaagcaaatggcattgaaccaccaaaacgacccagtagttcgcga
cccagtaaaacttcatctgcatgctcacctgcagaacgtaccaaaattgagattctcctc
tgcaagctcacatctggaagtcctgaggatcagcgatctgctgcaggtgaaatccgcctt
cttgccaagcggaatgcagataatcgtgtggcaattgctgaagctggtgcaatccctctc
cttgtaggccttctctcaactcctgattctcgtacccaagaacatgcagtaacagctcta
cttaacctttccatctgtgaagataacaaaggaagcattgtctcatctggagcagttcct
agtatagttcatgtgctcaggatagggagcatggaggctcgagaaaatgcggcagctacc
ctctttagcctttcagttattgatgaaaataaggttacaattggtgcttctggggccatc
ccaccacttgtgacactgctgagcgaaggtacccagagaggaaagaaggatgcagcaact
gcactcttcaatttgtgcatttaccaagggaacaagggaaaggcagtgagggctggagtt
gtgcctacactgatgcatttgctcacagaacctggaggtggaatggtggatgaagcactg
gccatcctggccatactgtctagccaccctgaagggaaggcggccattggggctgctgag
gcagtgccagttttggtggaggttattgggaatggatctcccaggaacagagagaatgca
gctgctgtcttggtacatctctgtgccggagaccaacaatatctagcagaggctaaggaa
cttggggtgatgggccctctggtggatttggcacaaaacggcacagacaggggtaagcga
aaagctgcacagctgcttgaacgtatgagcaggtttattgagcagcaaaagcaagctcag
gttcaaactgagtctcagtctcagatacaggaggcaaggctaccatcaaatgctgctgac
agctga
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integrated database retrieval system
