Citrus sinensis (Valencia orange): 102612060
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Entry
102612060 CDS
T02983
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03022
Basal transcription factors
cit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102612060
09124 Replication and repair
03420 Nucleotide excision repair
102612060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102612060
03400 DNA repair and recombination proteins [BR:
cit03400
]
102612060
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102612060
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102612060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
102612060
NCBI-ProteinID:
XP_006477302
UniProt:
A0A067F8T9
LinkDB
All DBs
Position
3:join(6325452..6325486,6326087..6326264)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF
RDQNSYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgccattaaaggactgtttatttcctgtgacatacccatggcacaattcatc
atcaatatgaatgcttcaatgccacaatcacagaagttcataatacatattctggatagt
actcacctctttgtgcaaccgaatatggctgaaatgatacggagtgcaattgctgagttt
agagaccagaattcttatgagaagcctgcatga
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