Citrus sinensis (Valencia orange): 102612069
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Entry
102612069 CDS
T02983
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102612069
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102612069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
Suf
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
102612069
NCBI-ProteinID:
XP_006480143
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All DBs
Position
8:complement(join(3690343..3692211,3692958..3693452))
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AA seq
787 aa
AA seq
DB search
MLTISTQTLPSITLFLQRHVSFFPHVTTVRTPRSYHFLSAPLSSAASQSTFVEQLAGEKD
SSQEEKWDMFKNSDAESGSVDFDVGAAGSEMRHLDEPVVEVIELEELPEQWRRAKLAWLC
KELPSHKGGTLVRILNAQKKWLRQEDGTYLAVHCMRIRENETGFRVYEWMMQQHWYRFDF
ALATKLADYMGKERKFAKCRDIFDDIINQGRVPSEMTFHILIVAYLSAPVQGCLDEACSI
YNRMIQLGGYQPRPSLHNSLFRALVSKPGGLSKYYLQQAEFIFHNLLTSGLEIQKDIYSG
LIWLHSYQDNIDKERISLLKKEMQQAGFEEGKEVLLSVLRVCAKEGDVEDAEKTWLRLLE
SDNGIPTPAFVYKMEAYAKIGEFMKSLEIFREMQERLGSASVPAYHKIIELLCKAEETEL
TESLMKEFVETGMKPLMPSYINLTNMYLNLGMHDRLHLAFSECLEKCRPNRTIYGIYLES
LKNAGNIEKAEEIFNHMHSDQTIGVNTRSCNIILSAYLSSGDFVKAEKIYDLMCLKKYEI
ESAWMEKLDYVLSLNRKEVKKPVSLNLSSEQRENLIGLLLGGLCIESDEKRKRHMIRFQF
NENSRMHSVLRRYLYDQYHEWLHPSFKVSDGSDDIPYKYSTISHPYFCFYADKFWPKGRL
VIPKLIHRWLTPRALAYWFMYGGHRTSVGDILLKLKVSSEGIALVFKTLKARSLDCRVKK
KGRVFWIGFLGSNSTLFWKLIEPYVLDELKEDLLNEGSEYRKLDTQNINFHCGSDSDEKA
SDYSDDD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaatctcaacccaaacacttccttcaatcaccctcttcctccagcgccacgtc
agcttcttcccccacgtcactaccgtaagaacaccgaggtcctaccacttcttatccgct
ccgctttcgtccgccgcttcacagagtactttcgtcgaacagttggcgggcgagaaagat
tcttcccaagaagagaaatgggacatgtttaaaaacagtgatgccgaaagtgggtctgtt
gattttgatgttggggctgcggggagtgaaatgaggcacttggatgagccggttgtggag
gttatagagcttgaggagctgcccgagcagtggcggagggctaagcttgcctggctttgt
aaagaattgccgtcgcataaaggggggacgcttgtgaggattttgaatgcgcagaagaag
tggttgaggcaggaggatggtacgtatttggcagttcattgtatgcggattcgcgagaat
gagactggattcagggtttacgaatggatgatgcaacaacattggtatcgatttgatttt
gctcttgctaccaagttggcagattacatgggtaaggagcgaaagtttgccaaatgtcgg
gacatatttgatgacataattaatcagggccgtgtgcctagtgaaatgacatttcacatt
ttgattgttgcgtatctcagtgcaccagttcaaggttgcttggatgaagcatgtagtatt
tacaatcgtatgatacaactaggaggttaccaaccccgtcctagcttgcataattctctc
ttcagagctctggtgagcaaacctggaggtttgtcaaaatattacctccaacaggcggag
tttatttttcacaatttgttgacatctggacttgaaatacaaaaggatatttacagtggt
ttaatttggcttcatagctatcaagacaacattgataaagaaaggatatcattgctaaag
aaagagatgcaacaagcaggatttgaggagggcaaagaagtgcttttgtctgtcttgaga
gtttgtgcgaaggagggggacgtggaggatgcagaaaaaacttggctcagactgcttgaa
tctgacaacggcatccccactcccgcttttgtttataaaatggaagcttatgccaagatt
ggagaatttatgaagtctttggaaatatttagggagatgcaagagcgtttgggttctgct
agtgtaccagcatatcataagatcatagagttgttgtgtaaagctgaggagacggagctt
acagaatccctaatgaaagagtttgtagagactggtatgaagccactaatgccttcttat
attaatctgacaaacatgtacctcaatttgggcatgcacgataggttgcacttggctttc
tctgagtgccttgagaaatgtcgacccaatcgtactatttatggcatttatttggaatct
ttgaaaaatgctgggaatattgagaaagctgaggagatctttaaccatatgcacagtgac
cagacaattggtgttaacactagatcgtgcaacatcattttaagtgcatacctctcttct
ggagattttgtgaaggcagaaaagatatatgatttgatgtgtctgaagaaatatgaaata
gagtctgcatggatggaaaaacttgattacgtcttgagcttgaacagaaaagaggtcaag
aaaccagtgagtctgaatttaagctcagaacagcgagagaatttaataggtttactgtta
ggtggtctgtgtattgaatcagatgaaaagaggaagaggcacatgatccggtttcaattc
aatgagaattctagaatgcattcagttttgaggagatatttatatgaccagtatcatgag
tggttacatccttcttttaaggtgagtgacggtagtgatgatataccatacaagtattct
accatctcgcacccttatttttgcttttatgctgacaagttttggccaaaaggacggctt
gtgattccaaagctaatccatcgatggctgacaccacgagctctggcatactggttcatg
tatggggggcatagaacatcagttggggatatcctattaaagctaaaggtgagcagtgag
ggtattgcattggttttcaaaacattaaaagcaagatctcttgattgtagggtaaagaag
aaggggagagtgttttggataggttttctaggaagcaattctacattgttctggaaactg
atagaaccttatgttctggatgagttgaaagaagatcttcttaatgaaggttctgagtat
agaaaattagatactcaaaatatcaactttcattgtgggtcagattctgatgaaaaagct
tctgattacagtgatgatgattga
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