KEGG   Citrus sinensis (Valencia orange): 102612108
Entry
102612108         CDS       T02983                                 
Name
(RefSeq) cullin-4 isoform X1
  KO
K10609  cullin 4
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03420  Nucleotide excision repair
cit04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102612108
  09124 Replication and repair
   03420 Nucleotide excision repair
    102612108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cit04121]
    102612108
   03400 DNA repair and recombination proteins [BR:cit03400]
    102612108
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102612108
Ubiquitin system [BR:cit04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     102612108
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102612108
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102612108
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102612108
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 102612108
NCBI-ProteinID: XP_006467459
UniProt: A0A067GF25
LinkDB
Position
2:join(31778052..31778334,31779065..31779180,31779287..31779633,31779883..31780063,31780395..31780517,31780605..31780892,31781287..31781412,31781521..31781622,31781720..31781773,31783142..31783248,31783357..31783417,31783512..31783643,31783762..31783899,31784024..31784104,31784208..31784288,31784407..31784487,31784621..31784734)
AA seq 804 aa
MSLPNKRTASNNNSNNYSPSAMKKAKSQAVACSVDTANKNGLHHDNDAVFDPSSISLDDD
LKPDEPRQQAAANLSRKKAQPPQPAKKLVIKLLKAKPTLPTNFEEDTWAKLKLAIKAIFL
KQPTSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECEEHISAAIRSLVGQSPDLVVFLSLV
ERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVEHKTVTG
LLRMIERERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSD
VPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHR
TEDLQRMYSLFSRVNALESLRQALAMYIRRTGHGIVMDEEKDKDMVSSLLEFKASLDTIW
EQSFSKNEAFCNTIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKV
LVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFK
DIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFK
EFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKD
ATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK
ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKR
IESLIDREYLERDKNNPQIYNYLA
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtctctccccaacaaacgcacagccagcaacaacaacagcaacaattattcaccttcg
gcaatgaagaaggccaagtcccaagccgtggcctgctctgtggacaccgccaacaagaac
ggtctccaccacgacaacgacgccgttttcgatccctcttctatttctctcgatgacgat
cttaagcccgacgaaccccgacaacaagccgccgccaatttatcccgcaaaaaagcccag
ccccctcagcccgccaaaaaacttgtcatcaagctcctcaaagctaaacccacactgcct
acaaattttgaggaggatacatgggcaaagctgaagttagctataaaagcaatattcttg
aaacaaccaacttcctgtgatttggaaaagctatatcaggctgtcaatgatctttgcctg
cacaagatggggggaaacctttatcagcgaattgaaaaggagtgtgaagaacatatatct
gctgcaattcgatcgttggtcggtcaaagccctgacttggtggttttcttatcactggtt
gagagatgctggcaggatctttgtgatcagatgttgatgattcgtggtatagctttgtat
ctagatagaacatatgtgaaacaaacaccaaatgtgcgttcattgtgggacatgggattg
cagcttttccggaaatatctttcttcatattcagaagttgagcacaaaaccgtcactggt
cttttaaggatgattgagagggaaagattaggtgaagctgttgataggacactccttaat
catctattgaagatgttcaccgctctgggaatttactcagaaagctttgagaaaccattt
cttgagtgcacgtcggagttttatgccgccgaaggcatgaaatacatgcagcaatcagat
gttccagattacttgaagcacgtggagataaggttgcatgaagaacatgaaagatgttta
ctataccttgatgtaagcacaagaaagccacttatagcaactgccgaaaggcaacttctt
gaacgacatatatctgcaattctcgacaaggggttcacaatgctgatggatggccatcgt
actgaggacctacagaggatgtactcactattttcaagggtcaatgctctcgaatcatta
aggcaggcccttgctatgtacattcgtagaactgggcatggcattgtcatggatgaagag
aaagataaagatatggtttcgtctcttttggagttcaaggcttctcttgatacaatatgg
gaacaaagcttctcaaagaatgaagcattttgcaacacaataaaggacgcatttgagtat
ctaattaatcttcgtcagaaccgacctgctgagctgattgcaaagtttctggatgagaag
cttcgggctggaaataagggtacttcagaagaggaattggagggtacacttgataaagtt
ctagttttattcaggtttattcagggtaaagatgtgtttgaagcattctataaaaaggat
cttgcaaaaaggttactgttggggaagagtgcttccattgatgcagagaaatctatgatt
tccaagctaaagactgaatgtggcagccaatttacaaacaaacttgaagggatgttcaag
gatattgaattatcaaaggagataaatgagtccttcaaacagtcatcccaggccaggaca
aaactcccatcagggattgagatgagtgtccatgtcttgacaaccgggtactggcccaca
tatccccccatggatgttaggcttcctcatgaactgaatgtctatcaggacatttttaag
gagttctatttaagcaagtacagtggaaggcgcttaatgtggcaaaattcattaggtcac
tgtgtgttgaaagctgagtttcctaaaggtaaaaaggagctggcagtttccctatttcag
acagtcgttttgatgttatttaacgatgctcaaaagcttagttttcaagatattaaggat
gccactggcatagaagataaggaactgaggaggactctacagtctcttgcttgcggtaaa
gtacgcgtcctgcaaaagttgccaaagggaagggatgtggaggatgatgattcatttgtg
ttcaatgaaggatttactgctcccctttatcgtattaaggtaaatgctatacagatgaag
gaaacagtggaagaaaacactagcaccactgaaagagtatttcaggaccgtcaatatcag
gtggatgctgccattgttcggataatgaagactagaaaagtgttgagtcacacacttcta
ataaccgaactcttccaacagctgaaatttcctataaagccggccgatctgaagaaaagg
attgagagccttatcgatagggagtacctggagcgtgacaagaacaatccgcagatatat
aattacctggcctag

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