KEGG   Citrus sinensis (Valencia orange): 102612187
Entry
102612187         CDS       T02983                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102612187
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     102612187
    REST complex
     102612187
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102612187
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress PAH_ZNF598 HHD_RTEL1
Other DBs
NCBI-GeneID: 102612187
NCBI-ProteinID: XP_006483749
LinkDB
Position
4:complement(join(27248391..27248543,27248667..27248778,27248853..27249013,27249138..27249290,27249381..27249519,27249599..27249699,27249858..27250505,27251165..27251256,27251402..27252097,27252594..27252848,27252960..27253087,27253424..27253578,27253695..27253972,27254308..27254337,27254425..27254500,27255158..27255288,27255729..27256074,27256161..27256328,27256437..27256535,27256617..27256803,27256895..27257059,27257680..27257753))
AA seq 1448 aa
MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ
DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED
EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF
QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA
DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ
RFPHKRKSARKIEDSTAEPLHQGGEGDENFGMHPVSSSYDDKNAMKSMFSQELSFCEKVK
DKLRDDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLA
DVMSKKSLWNEGRIPKSVKVEDRDRDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVG
PKMSMYSSKDKYLAKPIQELDLSNCERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWV
SVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIK
TDGPIRVEDHFTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCR
SDFNKVWAEIYSKNYHKSLDHRSFYFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAI
AAGNRRSIVPHLEFEYSDPDIHEDLYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVP
SRPQGAEDTEDVVKAKSHTVKSRAASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQ
SSSSRAWLPNGDHGIKEDVSVEADHNARKSDNFCDSSEQDKVQNNAAMADETSGISKQAS
TNERLIGTNAAIAAAADQSNGRSNIENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSE
GGDCSRQNISTNGVMTEGAKILRYNAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGL
EAVHKAKDGAVSRQYQTRHGEEVCCGEAGGENDADADDEGEESAHRSSEDTENASENGDV
SGSESGDGEGSSREEHEEDGDQDEHDNKAESEGEAEGMADAHDVEGDGTSLPFSERFLLS
VKPLAKHVSPSLHDKEKGSRVFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWKTSN
DSSPTDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLLYKLVKHLQAV
APDEMDNKLLQLYAYEKSRKPGRFVDVVYHENARVLLHDENIYRIECSSIPTRLSIQLMD
NGHDKPEVTAVSMDPNFAAYLYHDFLSVPDKKEKPGIFLKRNKRKFVGNDEFSATCRAME
GLQVVNGLECKITCNSSKVSYVLDTEDFLFRKKKRTFHQNGPCHNQARASNGYPIRRLQR
FQRWLSGS
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgaagaggtccagagacgaggtttacatgaactctcaaattaaacggccgatgatttct
tcacgaggagaaccctctgggcagacccaagtggtgggaggaggaggaggaggaggtgca
cagaagttaacaacaaatgatgccctagcatatctcaaggctgttaaggacatatttcaa
gacaaaagggagaaatacgatgactttcttgaagttatgaaagacttcaaagctcaaaga
attgacacagcaggtgtcatagcgagggtaaaggagctgtttaaagggcatagagaccta
attttgggtttcaataccttcctgccaaagggatatgagatcacacttccacttgaggat
gagcagcctccacctaagaagcctgttgaatttgaagaagctattaattttgtaaacaag
attaagacaagatttcaaggtgatgatcatgtttataaatcatttttagacattttgaac
atgtacagaaaggaaaacaagtccatcacggaagtctaccaggaggttgaagcacttttc
caagatcatccagatctgcttgaggagtttacacattttctgccagattcttcaggagca
gcatcaattcattatgttccatctggaaggaattctatactccgggataggagctcggcc
atgcccacagcgcggcaagtgcatgttgacaagaaagaaagggctatggcttcacatgct
gaccgggacctcagtgtggaccgtcctgatcccgatcatgatagggtcctgctgaagtca
gacaaagaccaaaggaggcgtggggaaaaagaaagggaaaggagagacgaccatagaaga
gaacgagaacgagatgatagagattttgagaatgatgtaaatagagacttcagcatgcaa
cggtttccccacaagagaaaatctgctcgtaaaattgaagactcaactgctgaaccgttg
catcaaggtggggaaggtgatgagaactttggaatgcatcctgtttcatcctcttatgat
gataaaaatgccatgaaaagtatgttcagccaggagctctctttctgtgagaaagtcaag
gataagttacgtgatgattaccaggagtttctgaggtgccttcatctctataccaaggaa
attatcacacgatcagagttgcaatctttggtgggcgacttgcttgggagatatccagat
ctaatggatgggttcaatggatttttggcacgttgcgagaaaagtgaggaattacttgct
gatgttatgagcaaaaaatcattgtggaatgaaggacgtatacccaaatctgttaaggta
gaggacagggatagagatcgagatcgtgaaagagatgacggggttaaggatagggaccgc
gaggcccgagaaaaagatagacttgacaaaagtgtagcctttgtcaacaaagatgtaggt
ccaaagatgtctatgtactccagcaaggataagtatcttgcaaaacccattcaagaactt
gacctctctaactgtgagcgctgcactcccagttatcgactactgccaaaaaactatcta
attccttcagcaagccagagaacagagcttggtgctgaagtactgaatgatcattgggta
tctgtcacttcaggaagtgaagattactctttcaaacacatgcgcaagaaccagtatgaa
gaaagcctgtttcgatgcgaagatgacaggtttgagctggatatgttgttagagtctgtt
aatgtaactaccaaacgtgtggaagaactgttagaaaagattaataataatacaatcaaa
acagatggccctattcgtgttgaagatcacttcacagctctaaatctaaggtgtattgag
cggttgtatggtgatcacggacttgatgtgatggacgtattgcggaagaatgcttctcta
gctctgccagttatattgacacgattgaagcagaaacaagaagagtgggccagatgccgt
tctgattttaacaaagtttgggctgaaatttactccaagaattatcataaatctcttgat
catcgtagcttctatttcaaacagcaggactcaaagagcttgggtgcaaaagcattgtcg
gcggagatcaaagaaatcagtgagaagaagcgcaaggaagatgacgtgcttcttgccatt
gctgctggaaacaggcggtctattgttccacatttggaatttgagtattcagatcctgac
atccatgaagatttgtatcagcttattaaatattcatgtggggaaatgtgtacaactgaa
cagttggacaaagtaatgaagatttggacaaccttcttggaaccaatgcttggagttcct
tctcgacctcagggtgcagaggacactgaagatgttgtaaaggccaagagtcatactgtc
aaaagtcgtgctgctagtgttggagatagcgatggcagtcctgatggtgatgctgctgcc
atgacttccaaacattcaaatccttcccgaaatggagatgaaagtattcctccggagcag
tcaagttcttctagggcatggttgccaaatggagatcatggaataaaagaagacgtttcg
gtggaggcagaccataacgctcgtaagagtgataatttctgtgatagttctgagcaagac
aaagtgcagaataatgcagctatggctgatgagacttcggggatcagcaaacaggctagt
accaatgaacgattgatcggtacaaatgctgcaattgctgctgcagcagatcaaagcaat
ggaagaagtaacatagaaaatacttcagggcttagtgtggcacattctagacctggtaat
cacattgttgagggtgggcttgagttgaggtccagtaatgaaattctaccttcttcagag
ggtggagactgctcgaggcagaatatatccacaaatggggtgatgacagaaggagccaag
attctcagatataatgcagagtctgtcaagcaattcaaaattgaaagagaagagggtgaa
ttatctccaaatggagatttcgaggaggataattttgcagtttatggagaatctggtttg
gaggctgtgcataaagcaaaggacggtgctgttagcagacaatatcaaaccagacatgga
gaagaagtatgctgtggggaggctggtggagaaaatgatgctgatgctgatgatgaaggt
gaggagagcgctcacaggtcttcagaggacaccgagaatgcttctgagaatggtgatgta
tctggaagtgagtctggtgatggcgagggtagctctcgggaagagcatgaggaagatgga
gaccaggatgagcatgataacaaggcagagagtgaaggagaagctgaagggatggctgat
gctcatgatgttgaaggagatggaacatcattgccattttcagaacgttttctactatct
gtgaagcctctagcaaagcatgtctccccatcgctacatgacaaggagaaaggctctaga
gttttctatggcaatgattccttctatgtgctttttaggcttcaccaaacattgtatgag
agaatacaatcagcaaagattaattcatcatctgcagagaggaaatggaagacttcaaat
gattcaagccctactgatctatatgccaggttcatgaatgcactttacaatttacttgat
ggttcttctgataatacaaaatttgaggatgattgccgagctattattggcactcaatcc
tatgttttatttacattggacaagctgctatataaacttgtcaaacatctccaagcagtt
gcacctgatgagatggacaacaagcttctccaactatatgcatatgagaaatcgagaaag
cctggaagatttgttgatgtagtttatcatgaaaatgctcgcgttctacttcatgatgag
aatatatatcgtattgaatgttcatccatacccacccgcctatctattcagcttatggac
aatggacacgataagcctgaagtgacagctgtttccatggatcctaattttgcagcgtac
ctgtaccatgacttcctttcagttcctgacaagaaagagaagcctggaatattcttgaag
aggaataaacgcaaatttgtaggcaatgatgagttttcggcaacatgccgggccatggaa
gggcttcaagttgtcaatggtttggagtgtaagataacttgcaattcatccaaggtctca
tatgttttggatactgaagattttttgtttcgtaaaaagaaaagaactttccatcagaat
ggcccgtgccacaaccaggcaagggcttcaaatggttatccaattagaagattacaacgg
tttcaaagatggctttctggctcgtaa

DBGET integrated database retrieval system