Citrus sinensis (Valencia orange): 102612486
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Entry
102612486 CDS
T02983
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03020
RNA polymerase
cit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102612486
09124 Replication and repair
03420 Nucleotide excision repair
102612486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102612486
03400 DNA repair and recombination proteins [BR:
cit03400
]
102612486
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102612486
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102612486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
102612486
NCBI-ProteinID:
XP_006482856
UniProt:
A0A067H6W1
LinkDB
All DBs
Position
4:join(29276149..29276201,29276286..29276375,29276469..29276547,29276881..29276976,29277956..29277988)
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAELAKHSRVY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgaccgttacgaacgatttgtcgtccccgaaggcaccaaaaaggtttcg
tacgagagagacacgaagattataaatgcggcgtcgttcactatagagagagaggagcat
acaatcggcaatattcttcgcatgcaattgcatagggatgaaaacgttttgttcgctggt
tacaagctccctcaccctcttcagtacaaaataattgttaggattcacacaactagtcag
tcttcaccaatgcaggcgtataaccaggccatcaacgatctagataaggaacttgacact
ctgaaaagtgcatttgaggctgagttggcgaagcattcgagagtttattaa
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