Citrus sinensis (Valencia orange): 102612498
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Entry
102612498 CDS
T02983
Name
(RefSeq) elongator complex protein 4 isoform X1
KO
K11375
elongator complex protein 4
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cit03016
]
102612498
Transfer RNA biogenesis [BR:
cit03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
102612498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAXNEB
ATPase
DUF7125
Motif
Other DBs
NCBI-GeneID:
102612498
NCBI-ProteinID:
XP_024957389
LinkDB
All DBs
Position
1:join(15981379..15981594,15982018..15982192,15982296..15982522,15982618..15982693,15983274..15983430,15984287..15984365,15984613..15984772,15984852..15984943,15985093..15985260)
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AA seq
449 aa
AA seq
DB search
MKAAQTPHKKEVPCVFGRPPQLPITKIIRLSAALLARHRRCSTPTAALSLPPRVCSLRPE
SLSCRLSTIYSWHFTGKTKLCSVDAAMATTKPRLSSFSRNLSAVSSSQTPGVKCGPNGTM
FVSSGIADLDKILGGGFPLGSLVMVMEDAEAPHHMLLLRNFMSQGLVHGQPLLYASPSKD
PRGFLGTLPSPASLKHDKSRDRESEQEKGLRIAWQYKKYMGENQPNFDSHRDNKQDYCNE
FDLRKPLERHYFTRQRVNCVGIQDSKNLAALQEHCASFLAQHQRNDGSCALAGRIAIQSL
CAPQCEHSNMDWEMLSFIKSLKGMVRSSNAVVVITFPPSLLSLSSTKRWQHMADTLLSVA
AIPDEDKELAKLLSGYQDMVGLLNVHKVARLNTQVPLILEATTFSIKLQKRRFLVLECLN
QAPVDGSSGSSYGTSGSCSGSSKAGTLDF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgcccaaactccacataaaaaagaagtcccttgtgtgtttggccgcccgccg
cagctacccatcaccaaaataatccggctctccgccgcactactcgctcgtcaccggcgt
tgctcgacgccaactgctgctctatcactcccgccccgtgtctgctctttgcggcctgaa
tcattaagctgcagattgtcaaccatttactcttggcattttacaggcaagacaaagctg
tgttctgttgatgctgccatggcaacaactaagcctcggctaagcagcttctctcgcaac
ctatcggctgtatcctcgtctcaaacccctggagtcaaatgtggtcctaatggaactatg
tttgtttcatctgggatagctgatcttgacaagatacttggtggtgggttccctttagga
agtcttgtgatggtgatggaagatgcagaagcacctcatcacatgcttttgttaaggaat
tttatgtcacaagggcttgttcacggccaacctcttctttacgccagtccatccaaggac
cccagaggttttttgggtactttgcctagtcctgcctctctgaaacatgataaatctcgt
gatcgggaatcagaacaggaaaagggattgaggatagcttggcagtacaagaagtatatg
ggtgaaaatcaaccaaactttgatagccacagagacaataagcaagattactgcaatgag
tttgacttgagaaagccactggagaggcactattttaccagacaacgtgtaaattgtgtt
ggtatccaagactcaaaaaatcttgctgctcttcaggagcattgtgcctcatttttagct
caacatcaaagaaatgacggcagctgtgcattggctggtcgtatagctattcagtcatta
tgtgctccacaatgtgaacattccaacatggattgggaaatgctttcttttattaaatct
ctgaaaggtatggtgcggtcttcaaatgcagtggttgttataacctttccgccctccctt
ctctcactttcgtccactaaacgatggcagcacatggcagacactctgctttctgttgca
gctatcccagatgaggacaaggaattggcaaaactcctttccggttatcaggacatggtt
ggccttcttaatgtacacaaagtagctcgtttgaatacacaggtgcctttgatactcgag
gcaacaacattttcaataaagttgcagaagcgtaggttcttggttttagaatgtctcaat
caagctcctgttgatggctcaagtgggagttcatatggcacatcaggtagttgctctgga
tcatccaaggctgggacccttgatttttag
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