Citrus sinensis (Valencia orange): 102612523
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Entry
102612523 CDS
T02983
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102612523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102612523
03019 Messenger RNA biogenesis [BR:
cit03019
]
102612523
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102612523
RNA polymerase I system
102612523
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
102612523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
102612523
NCBI-ProteinID:
XP_006468680
UniProt:
A0A067GP01
LinkDB
All DBs
Position
2:join(25927563..25927652,25927732..25927823,25927908..25927963,25928890..25928951,25929764..25929811)
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AA seq
115 aa
AA seq
DB search
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN
GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcaccggcacaaattccaacaagcttcgggcatgagctgagagcttgcctc
cgttgtcggcttgtcaaaacctatgatcagtttagagaatcgggatgcgagaactgtccc
ttcttcaagatggatgaagaccacgagcgtgttgttgattgtactacccctaattttaat
ggcattatatcagtcatggatccaactagaagctgggctgctcgctggttgcgaattgga
agatttgtccctggttgttatactcttgctgtctcagaagccctacctgaggacttgcag
aacttatgtgaagacgagcgcgtgcaatatgtgccgccaaaacgttaa
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integrated database retrieval system
