Citrus sinensis (Valencia orange): 102612913
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Entry
102612913 CDS
T02983
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102612913
09122 Translation
03015 mRNA surveillance pathway
102612913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102612913
Spliceosome [BR:
cit03041
]
Complex A
Other components
Complex A specific factors
102612913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
102612913
NCBI-ProteinID:
XP_006488581
LinkDB
All DBs
Position
8:join(30302249..30302459,30302566..30302656,30303199..30303895,30304349..30304499,30304599..30304659,30305245..30305371)
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AA seq
445 aa
AA seq
DB search
MSGMYGQEGGDPAYVGGGYGGGGSAGVYGGYGGDGGGGYSGGGGRGGGYGGGRGGGGRGG
GYGGGYSQNRGGDRGGRGGGGRGGGRGGSGRDGDWKCPNPSCGNLNFARRVECNKCGAPS
PAGASDRTASGGSGGYNRGGSGGGFGGNRGGRGDGGRANYDGGRGTYEGRSGGGNRGSSY
GGSQGREDTSYGHVPPSSYPGASGNYPPANSYGGNTNYEMDAVPPPTSYTGGPTSYPPSY
GGPVGGYGGDSFGDAGGGSRAGPPAAYDSGYAGGGPRYQGGSYSNAPADTSAKVKQCDGN
CDSYCDNSRIYISNLPPDVTVDELRELFGGIGTVGRIKQKRGYKDQWPWNIKLYTDEKGN
NKGDAVLSYEDPAAAHAAGGFFQDHEIRGYKISVVMAEKTALKTGGGGGGGRGGYGNGGD
RRRDNYRDGGGPDRHQHGGNRSRPY
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggatgtacggacaagaaggcggagatcctgcctacgttggaggcggatacggc
ggaggaggcagtgctggtgtttatggaggttatggaggcgatggtggtggcggttatagt
ggaggcggcggtcgtggtggaggatatggtggcggtcgtggcggtggtggaagaggcgga
ggatacggtggtggttattcgcaaaatcgagggggagatcgcggtggcagaggtggcggt
ggacgaggtggcggccgcggtggaagcggtagagatggagattggaagtgtcctaaccct
agctgtgggaatttgaattttgcaagaagggttgagtgtaacaagtgtggcgcaccctct
cctgcgggtgcaagtgatcgaactgccagtggcggcagcggtggatataacaggggagga
agtggtggtggatttggtggtaatcgtggtggtcgaggtgatggtggccgagccaattat
gatggaggtagaggtacctatgaaggtagaagtggaggaggtaacagaggcagctcttat
ggtgggagtcaaggaagagaagatactagttatggtcatgttccaccatcatcgtatccg
ggggctagtggaaactacccaccagctaattcttatggtgggaatacaaattatgaaatg
gatgcagttcctccacctacaagctatacaggtggcccaacatcttaccccccatcctat
ggtggtcctgtgggtggatatggtggtgatagttttggcgatgcggggggtggcagcagg
gctggcccacctgctgcttatgatagtgggtatgctggtgggggtcctcggtaccagggt
ggcagttatagtaatgcacctgctgatacctcggctaaggttaagcagtgcgatgggaat
tgtgatagttattgtgacaactcaaggatatacatatcaaatttgccgccagatgtgaca
gttgacgaattgagggaactttttgggggcattggaacagttggaagaataaagcagaag
cgaggctacaaagatcaatggccatggaacataaaattgtacacagatgagaagggaaac
aacaaaggtgatgcagttttgtcctatgaagatccagctgctgcacatgctgctggtggt
tttttccaagatcatgaaataagaggttacaaaatcagtgtggtgatggcagagaagact
gcactgaaaactggtggtggtggtggcggtggtagagggggctatggcaatggtggagac
aggcgcagggataattatagagatggtggtgggccagatagacatcaacatggtggaaac
cgttcgcgcccatattga
DBGET
integrated database retrieval system
