Citrus sinensis (Valencia orange): 102612938
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Entry
102612938 CDS
T02983
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102612938
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102612938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
GRP
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
102612938
NCBI-ProteinID:
XP_006491994
LinkDB
All DBs
Position
3:join(18123582..18124319,18125436..18125900,18126179..18126427,18126830..18127081,18127370..18127449,18127613..18127721,18127816..18127942,18128049..18128065)
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AA seq
678 aa
AA seq
DB search
MDRSRSKRNYYYDHQDYDGDTMGRTKPRYNHYYQPNNNYRHRGNNNNNTNNIMNNNTSIN
NSNNRANSNPKDPSLMVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPG
DEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILESDGGGGFYGEEEEEYGGGGGV
GGGGFRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHSLPRCVSM
SEEIVQVVGDINNVKNAVAIISSRLRESQHRDRSHFHGRLHSPDRFFPDDDYVPHMNNTA
RRPSMDGARFSGSNYRSNNYGPRPSGYSIEAGAAPMSDSVQPFYGEDLVFRMLCPIDKVG
RVIGESEGIVELLQNEIGVDLKVADPVDGSDEQIITISSEEGPDDELFPAQEALLHIQTR
IVDLGADKDNIITTRLLVPSSEIGCLEGRDGSLSEMRRSTGANIQILSREEVPACVSGTD
ELVQIVGEIQAARDALVEVTTRLRSYLYRDFFQKETPPSSTGPTGSALVVEAASPIDITP
AREVQTVTDPPAATHQSVQIPATSQPSREAAGSVSETVKQNESERREDVPTVINRVPLPL
VTRSTLEVVLPDYAVPKLITKSKTLLTRFSEMSGASVSLVEGQPEGTQKIIQISGTPEQV
ERAQSVLQGFILSTQDAD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggacagatctagatccaagaggaactactactacgaccaccaggactacgatggagat
accatgggtagaaccaaacctcggtacaaccattattaccaacccaacaataactaccgc
caccgtggcaacaacaacaacaatactaataacatcatgaacaacaacaccagcatcaac
aacagcaacaaccgtgcaaattcaaaccctaaggatccttctctgatggtgaccacgacg
taccgcattctgtgccacgacatgaaagccggtggcgtgattggcaagtccggtagcatt
atcaagtcgataaggcagcacactggcgcgtggatcaacgtgcacgagttgatcccgggt
gacgaggagaggattattgagatttcggataccaggaggagggatcctgaaggaaggatg
ccttcgtttagtcccgcgcaggaggccttgtttttgattcacgataggattcttgagagt
gacggcggcggagggttttatggggaggaggaggaggagtacggtggtggtgggggtgtt
ggtgggggtgggtttagaggaggagggaatagagtggcgacgagaatggttgtgtccaga
atgcatgtcgggtgtttgttggggaaaggaggtaaaattattgagcaaatgaggatggag
accaagactcagattaggattctacctagagaccattccttgcctcgttgtgtttccatg
tccgaagagattgttcaggtagtaggtgatattaataatgtgaagaatgctgtagcaatt
atttcatcacgcttgagagaaagtcaacatcgtgaccgcagtcatttccatggacgatta
cattcgccagaccgctttttccctgatgatgattatgttcctcacatgaacaatacagct
cgacgaccgtctatggatggggcacgattttctggctccaattacagaagtaataactat
ggcccccgtccctccggttattccattgaagctggggctgctcccatgtctgacagtgtg
cagccattctatggtgaggaccttgtcttccgaatgctttgtccaattgacaaggttggc
agagttattggagagtcagagggcattgtagaactgcttcaaaatgagattggtgttgat
ttgaaggttgctgatcctgtggatgggtcggatgaacagataattacaatttcttctgag
gagggccctgatgatgagctttttccagctcaagaagccttgttgcatatacagactcgc
attgttgatctcggtgcggataaagacaatataataactactaggttacttgtcccatct
agtgaaattggctgtttagagggaagagacggatcgttatctgaaatgaggagatcaact
ggcgcaaacattcagatcctgtcaagggaagaagttccagcatgcgtatctgggactgat
gagcttgtacagattgtaggggagatacaagcagctcgagatgctcttgtggaggtgaca
acaagactgcggagttatttgtatagggatttctttcaaaaggagacgccaccttcttct
acaggtcctactgggagtgctttggtagtggaggcagcttctcctattgatataactcct
gctcgtgaagttcagactgtcactgaccctcctgctgcaacacatcagagtgtgcaaatt
ccagcgacatcacagccatcaagggaagctgcagggtctgtcagtgaaactgtgaagcag
aatgagagtgaacgacgtgaagatgtgccaactgtaattaatagagtcccactaccgctt
gtcactaggagcacactggaagtcgtcttaccggattatgctgttcccaaacttattaca
aagtcgaaaactttgcttactcgtttcagtgagatgtctggtgcctctgtgtcccttgta
gaaggtcaaccagaggggacacaaaagatcattcaaatatctggcactccagagcaggtt
gagagagcccagagcgtgcttcaagggtttattttgagcacgcaagatgcagactag
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