KEGG   Citrus sinensis (Valencia orange): 102612955
Entry
102612955         CDS       T02983                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102612955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102612955
Membrane trafficking [BR:cit04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    102612955
SSDB
Motif
Pfam: Vps35 L-fibroin
Other DBs
NCBI-GeneID: 102612955
NCBI-ProteinID: XP_052296705
LinkDB
Position
5:join(37750485..37750577,37750657..37750753,37750834..37750957,37751039..37751224,37751334..37751421,37751614..37751670,37751782..37751871,37751974..37752096,37752670..37752744,37752827..37752886,37753297..37753413,37753586..37753825,37753897..37753962,37754177..37754266,37754454..37754543,37754937..37755026,37755403..37755471,37755628..37755708,37755814..37755921,37756002..37756105,37756310..37756423,37756689..37756899)
AA seq 790 aa
MMLSGDEDEEKWLAEGIAGVQHNAFYMHRALDSNNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKDESRHGVSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKEVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSEYERDAETVMDAVEFVL
QNFTEMNKLWVRMQHQGPGRVREKREKERNELRDLVGKNLHVLSQIEGVDLEMYKENVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMD
RLSNYAVSSADVLPEFLQVEAFAKLSNAIGKVIDAQVDMPIVGAISLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSSAPKLEDSRATKQVVALLSAPLDKYNDILTALTLSNYPRVMD
HLDDGTNKVMAMVIIQSIMKNSTCISTAEKVEVLFELIKGLIKDLDGAAQDELDEEDFKE
EQNSVARLIHMLYNDDSEEMLKIICTVRKHIMTGGPKRLLFTVPPLVFSALRLVRQLQNQ
DGDVAGEEEPATPKKIFQLLNQTIETLLYVPSPEMALRLYLQCAEAANDCDLEPVAYEFF
TQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGIENRDTLTHKATGYSARLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILN
KYLYFFEKGNTQITASAIQSLIELITSEMQSESTTLDPADNAFFASTKRYIEFQKKKGGA
MGEKYDPINV
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatgttaagcggagacgaagacgaagagaaatggctggcggaagggatcgccggcgtc
caacacaatgccttttacatgcatcgcgctctggactccaacaatttgagggaagctctt
aaatactcggctcagatgctctccgagcttcgaacttccaaactctccccgcacaaatac
tacgaactctacatgcgagcttttgatgaattaaggaaactagagatgtttttcaaagac
gaaagcaggcacggtgtgtcaatcattgatctttatgagcttgttcaacacgctggcaat
attttgcctagattgtatctgctatgcacagtaggttctgtttacattaaatctaaagag
gctcctgcaaaggaagttcttaaagatcttgttgaaatgtgtcgcggtgttcagcatccg
atacgtggattattcttaagaagttaccttgctcaagtcagcagagataagttgcctgat
attggttctgagtatgaaagagatgctgagactgtgatggacgctgtagaatttgtgctg
cagaattttactgagatgaataagctttgggttcgaatgcaacatcagggacctggtcgc
gtaagagagaagcgggaaaaggagaggaatgagcttcgtgatcttgtaggaaaaaacctt
catgttctcagtcagattgaaggcgttgaccttgagatgtacaaagaaaatgttcttcct
agagtgttagagcaggttgtaaactgtaaagatgaacttgcccaatattatctgatggat
tgcattattcaggtctttccagatgagtatcacttgcaaacccttgagacactattgggc
gcctgcccccagcttcagccaacagttgacatcaagacagtgctatctcgactaatggat
aggttgtcaaattatgctgtttcgagtgcagatgtactacctgaatttcttcaagtcgaa
gctttcgctaaactgagcaatgccattgggaaggtgatagatgcacaggttgacatgcct
attgttggagctatatctttgtatgtctctcttcttacgtttacactccgagttcatcct
gatcggctggattatgtcgatcaagtgctgggtgcatgtgttaagaagctatctagtgcg
ccaaagcttgaagacagtagggcaaccaaacaagttgttgcacttttaagtgctccattg
gataaatacaatgatattctcactgccttgacactttctaattatcccagagttatggat
caccttgatgatggaacaaataaagtgatggcaatggttattattcaaagtataatgaaa
aacagcacttgcatatcaactgcagaaaaggttgaggtgttgtttgaactaataaaaggg
ctcatcaaagatttggatggagctgctcaggatgagcttgacgaggaggatttcaaggag
gaacaaaattctgttgctcgtctcatacacatgctttacaatgatgactcggaggaaatg
ttgaagataatatgtactgtaaggaagcatattatgaccggaggaccgaaacggctactg
tttaccgttcctcctcttgtcttttctgctctcaggttggttaggcaattgcagaatcag
gatggagatgtagctggagaagaagaacctgcaacaccgaagaaaatatttcagctcttg
aatcagactattgaaactcttttatatgttccatcacctgaaatggcattgagattatac
ctgcaatgtgctgaggctgctaatgactgtgatctcgagcctgttgcctatgaatttttc
actcaagcatttatgttatatgaagaagaaattgcggactccaaagcccaggtgacagca
atacatctgataattggaactctacagaggataagtgtatttggtattgagaatagggat
actttgacacacaaggccactgggtattctgcaaggcttttaaagaaacccgatcagtgc
cgagcagtttatgcatgctcacatctcttttgggttgatgatcaagatggtattaaggac
ggagaaagggtcctcctatgcctaaagcgtgccttgaggattgcgaatgctgctcaacaa
atggccaatgttgcacggggtagcagcgggcctgtagttctctttgttgaaatacttaac
aagtacctctatttttttgagaaaggaaacacacagatcacagcttcagcaatacaaagc
ctcattgagttaatcactagtgagatgcagagtgagtccacaaccctagatcctgctgat
aatgctttctttgcgagcacgaaacggtacattgaattccagaaaaagaaaggtggtgca
atgggtgagaaatatgatcccatcaatgtgtga

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