Citrus sinensis (Valencia orange): 102612986
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Entry
102612986 CDS
T02983
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102612986
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
102612986
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
CUE
DER1
Motif
Other DBs
NCBI-GeneID:
102612986
NCBI-ProteinID:
XP_006482071
LinkDB
All DBs
Position
6:complement(join(22755066..22755233,22755781..22755903,22756409..22756510,22756591..22756742,22757265..22757331,22757571..22757711,22758598..22758698,22758794..22758818))
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AA seq
292 aa
AA seq
DB search
MNGGPSGFNNAPVTRAFVIACALFTVFFGIQGRFNKLGLSYQDIFQNFRLWRLIVSGFAF
SSAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLKDPAMKLTSG
PYGLIFASFVPFYFDIPVSTRFRVFGVHFSDKSFIYLAGLQVLLISSLNRSLLPGMCGIL
AGSLYRPNFFRIRKAKFPEFITSFFSRLSLPSMGNPPAAPSRNVRGSIPSHAGRQAESNY
SLPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQARNDINAATNILLEAQPH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcccctctggttttaataatgctccagtcacgagagcgttcgtcatcgct
tgtgccctcttcaccgtcttctttgggatccaaggccgctttaataagctcgggttgtca
tatcaggatattttccagaactttcgattatggaggttgattgtgtcaggttttgccttt
tcatctgcgccagaactgatgtttggactctacctgctatattactttagggtgtttgag
aggcagataggttccaacaagtactcagtattcatattgttctctataacagtttctttt
ctctttgaggtccttacattagcactgctcaaagatcctgcaatgaaactcacgtctgga
ccatatggtctgatatttgcttccttcgtaccattttactttgacattccagtttcaaca
aggtttcgtgtatttggagtccacttctctgataagtctttcatatatcttgctggtctt
caggtgcttcttatatcatccttgaacagatctttattgcctgggatgtgtggcatcctt
gctggttctttgtatcgtccaaattttttccgcatccgaaaagcaaagttccccgagttc
atcacttcattcttttcacggctttctttgccatctatggggaatccgcctgcagcacca
agtaggaatgttcgtggaagtattccatcccatgctggacgacaagcagagagtaactac
tctttgcccgtgccttctaccatagagccaccggaagactccattgctatgctggtttct
atgggatttgacaggaactcagccagacaggcgcttgtgcaggctagaaatgacatcaat
gctgccacgaacattcttcttgaagcacagccccattaa
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