| Entry |
|
|---|
| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
|
|---|
| KO |
|
|---|
| Organism |
cit Citrus sinensis (Valencia orange)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cit00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:cit03009]
102613104
Enzymes [BR:cit01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102613104
Ribosome biogenesis [BR:cit03009]
Eukaryotic type
Pre-60S particles
Helicases
102613104
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
4:complement(join(1524676..1524946,1525442..1525585,1525669..1525775,1525898..1525987,1526080..1526178,1526264..1526377,1526482..1526587,1526695..1526774,1527125..1527385,1527774..1528010,1528420..1528680))
|
|---|
| AA seq |
589 aa
MESNPNKALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAAT
GSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSV
LLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMG
FQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQ
LASSKTPLGLHLEYLECEPDEKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAV
LKSLSLIPLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDP
NVFVHRVGRTARLGRQGRSIVFLSPKEEAYVEFLRIRRVPLQERKCSDDASDVVPEIRSA
AKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEVGKLAMGYGLLQLPSMSEVKIHS
LSTKGFVPVKDIKLEDIKYKDKSREKQRKKNLQAKKEAQQKEPKRQKPNKASDAATTVMR
KKTAKQRRATQAIEDEDELARDYRLLKKLKKGSIDESEFAKMTGTEELL |
|---|
| NT seq |
1770 nt +upstreamnt +downstreamnt
atggagtccaacccgaacaaagcgttaacagaaactcgcttttccgatttgaagccggcg
ctttccgagccagttctcgaagccttagctgaagccggctttgagttttgcacgcctgtt
caagctgccacaatccctttgttatgcagctacaaggacgtagccgtggacgccgccacc
ggctctggcaaaaccctagcttttgtcgtccctctagtggagatcctccgccgtgcctct
tctgctcggaaaccccaccagataatggggatgattatctcaccaacaagggagctatca
tcgcaaatataccatgttgcacagccgttcatctcaactttaccggatgttaagtctgtg
cttcttgtgggaggtgtggaggtgaaagcagatgtgaagaaaatagaggaagaaggagca
aatttgttgatcgggacacctgggaggctatatgatataatggaacgtatggatgtcttg
gattttcggaaccttgagattttggttctagatgaggctgacaggctcttggatatggga
ttccagaaacagatcagttacatcatatctcgcctgcctaaacttcgtagaactggcctt
ttttcagctactcaaactgaggcagttgaagagctatccaaagcagggctgaggaatcct
gtgagggttgaagtgcgagcagaatcaaaatcacatcatgtatcggcatcatcgcagcaa
ctagcctcttcgaaaacacctttaggccttcatcttgagtatttggaatgtgaaccagat
gagaaaccatcacaacttgttgatctgcttataaagaacaagtctaaaaagattataata
tatttcatgacttgtgcttgtgttgactactggggagttgttcttccacgtctggctgtt
ttgaagagtctctcgttgattcctcttcatggaaagatgaagcagactgctagggagaaa
gcattagcttcatttacatctctttcaagtggcattcttctatgtacggatgttgctgca
cgtggacttgacattcctggtgttgattgtatagtgcagtatgatccccctcaagatcca
aatgttttcgttcacagagttggtcgaactgctaggttgggtagacaagggcgctccatt
gttttcctatcacccaaggaggaagcttatgtagaattcctgcggataagaagggttcct
cttcaagagaggaaatgctctgatgatgcttctgatgtagttcctgagattcgatctgca
gcaaaaaaagaccgtgatgtcatggagaaaggtctcagagcatttgtttcttatatacgt
gcatataaagagcatcactgctcgtatatcttcaggtggaaagaacttgaggtcgggaaa
ttggctatgggttatggcttactacaacttccttcaatgtctgaggtaaagatccattct
ctttccaccaagggtttcgtcccagttaaagacatcaagttggaggacatcaagtacaag
gataaatcacgtgagaaacaaaggaagaagaatttgcaagcaaagaaagaggcacagcag
aaagaaccaaaacgacagaaaccaaacaaggcctcagatgctgcaactactgtgatgagg
aagaaaacagcaaaacagagacgtgctacccaggcaatcgaagacgaagatgagctggcc
cgggattaccgcctattaaaaaagctaaaaaagggtagtatagatgaaagtgaatttgca
aagatgacggggacagaagagttgctataa |
|---|
