Citrus sinensis (Valencia orange): 102613332
Help
Entry
102613332 CDS
T02983
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.10
KO
K14487
auxin responsive GH3 gene family
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102613332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
102613332
NCBI-ProteinID:
XP_006491633
LinkDB
All DBs
Position
2:complement(join(13527914..13528449,13528951..13529774,13529877..13529978,13530074..13530408))
Genome browser
AA seq
598 aa
AA seq
DB search
MEAANNTNGNGYGNNYECDIIRWFEYISENAGEVQRETLRRILEQNYDVEYLKKRLGDTK
IQDMDACEMETLYTSLVPLASHTDLEPYIQRIADGDTASLLTQEPITKLSLSSGTTEGRQ
KYVPFTKHSSQTTLQIFRLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTAGTATTH
YYASEEFKIKQEKTKSFTCSPEEVISSGEYKQSTYCHLLLGLFFSDQVEFITSTFAYSIV
QAFTAFEECWQDICIDIREGSLSSSRITLPKMRKAVLDTISPKPYLASKIEVVCKKLESL
DWFGLVPKLWPNAKYVYSIMTGSMQHYLKKLRHYAGDLPLVSADYGSTESWIGVNVDPSF
PPEDVTFAVIPTFSYFEFIPIHRRKQDCNSAIDDFIEDEPVPLSQVKLGQEYEIVLTSFT
GLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVDRGSQLLNKTG
AELVDFTSHADIVNQPGHYIIYWEIKGDVEEGVLNQCCREMDVSFVDPGYVVSRRTNSIG
PLELCIVKRGAFRMILDYFVGNGAALSQFKTPRCTSNQVLVRILNDWTIKRFHSTAYC
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagctaacaacaccaatggaaatggctatggaaacaattatgagtgtgacatc
atccggtggttcgaatacatatcggagaatgccggagaagttcaaagggagacacttcgc
cggattcttgaacagaattatgatgttgagtatttgaagaaacggttaggggacaccaaa
atacaagatatggatgcatgtgaaatggaaactctttacacttctttggtgcctcttgct
tcccatactgatttggagccttatattcaaagaattgcagatggggatactgcttctctt
ctcactcaagaacctatcaccaagctttcccttagctccggaaccacagaaggaagacag
aagtatgtaccatttacaaaacatagctcacaaactactcttcagattttcaggctggca
gcagcttatagatcaagggtttatccaataagggaaggagggaggattctagagttcata
tacagcagcaagcagttcaagacaaagggaggcttaaccgcaggaacagcaacaacacac
tattatgcaagtgaagagttcaaaattaaacaggaaaagacaaagtccttcacatgtagc
ccagaagaggtcatttctagtggagagtacaagcagtccacctattgccatcttctcctt
ggccttttctttagtgatcaagtagagttcataacatccacttttgcttacagtatagtc
caggcttttacagcatttgaagaatgctggcaagacatttgcattgatatcagagaagga
agtctcagctcatcaagaatcacattacccaaaatgagaaaagctgttctggatactatt
tctccaaagccatatttggcttcaaaaattgaagtggtctgcaagaagttggaaagttta
gattggtttggtctagttcctaagctgtggccaaatgctaagtatgtgtattcgataatg
acagggtcaatgcaacattacctgaaaaagctgaggcattatgctggagacttgccacta
gtgagtgctgattatgggtctactgaaagttggataggagtcaatgttgatccttcattt
ccccctgaagatgttacttttgcagtaatacccactttctcttactttgagttcatacct
attcataggagaaagcaagattgcaattcagctattgatgatttcatagaagatgaacca
gtgccactctctcaagtcaagcttggacaagaatatgagattgtcctcaccagtttcaca
gggctttataggtacagattaggagatgtagtagaagtggccggttttcacaaagggacc
ccaaaattgaacttcgtatgcaggagaaagcttatcttgactgttaatattgacaagaat
actgaaaaggacctccaattagtagtagacaggggatctcagctactgaacaagactgga
gccgagctggtcgattttacaagccatgctgacattgtaaatcaaccagggcactacatt
atttactgggagatcaaaggagatgttgaggagggagttctcaatcaatgttgccgcgaa
atggatgtttcctttgttgatcctggatacgttgtgtccaggagaacaaactcaattggc
ccattagagctttgtattgtgaagagaggggctttcaggatgattttggattatttcgta
ggaaatggggcagcattgagccagttcaagacccctaggtgcactagcaaccaagttctt
gtgagaattctcaatgattggaccattaaaaggtttcatagcacagcttattgttga
DBGET
integrated database retrieval system
