Citrus sinensis (Valencia orange): 102613407
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Entry
102613407 CDS
T02983
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102613407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102613407
Spliceosome [BR:
cit03041
]
Common components
Common spliceosomal components
SR proteins
102613407
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102613407
NCBI-ProteinID:
XP_006487650
LinkDB
All DBs
Position
8:join(15783017..15783092,15783213..15783291,15783541..15783620,15783731..15783797,15784397..15784468,15785273..15785479,15785578..15785764,15785852..15785857)
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AA seq
257 aa
AA seq
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MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIQKGRIIESFPRSKHRSRSR
SPRRRYRDDYRDRDYRRRSHSRSWDRYERDRYRGRDRDYRRRSRSRSASPDYSRGRGRGR
YDDYRRSPSRSVGSASPAQHSPSPGRSLSPRKNSPLRGESSDGRSRGERSPAPRSASPRG
GHGDTRSYSPGNSDVDD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcgggaggtcaggacctccagatatcaccgacacttactctcttctcgtc
ctcaacataaccttccgtactactgctgatgatctgtttccgctttttgacaagtacggc
aaggtcgtcgatattttcatacctagagatcgaaggacgggggactcccgtggttttgct
tttgtgcggtacaaatatgctgatgaggcgcaaaaggctgttgatagactggatggacga
gttgttgatggtcgtgaaataacagttcagtttgcaaaatatggtccaaatgccgagagg
attcagaaaggaaggattattgaatcattcccaagatcgaagcacaggtcaaggagtcgc
agtcctcggagaagatacagagatgattacagagatagagattatcgaaggaggagtcac
agtagaagctgggataggtacgaacgtgacagataccgtgggagggatagagattaccgt
cgacgaagtagaagcagaagtgccagtcctgattactccagaggccgtggcagaggcaga
tatgatgattatcgccggagtcctagtcgatcggttggcagtgcctccccagctcagcat
agccccagtcccggcaggagtctttcccctcgcaagaattctcctcttaggggtgagagt
tctgatggacgcagtcgtggtgagcggtctccagctcctcgaagtgcttccccccgaggt
ggacatggtgatacccgcagctattccccgggaaattcagatgttgatgactga
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