Citrus sinensis (Valencia orange): 102613468
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Entry
102613468 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102613468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102613468
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102613468
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102613468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102613468
NCBI-ProteinID:
XP_006482161
LinkDB
All DBs
Position
6:complement(join(23329715..23330398,23332060..23332368))
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AA seq
330 aa
AA seq
DB search
MAKFSVGRLEEGEGPSGNSKRQRRAPHRHPQTNLRDGEEEEEEEETHHQEEDDESVDNGG
NGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKIMN
KCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSCPI
PDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVNNRFIVLQEEGDGVLFILSSR
SETLGHVISVSCIAPLCKGCLFYSIFAGPAGSTVRFQSFTKNIQNRVDNPPSTGFLLVPI
ESFGSSGDLKLELCIRRLDISLQHVSRVVV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattctcggtggggagattagaagagggagaaggaccgagcggaaattcaaag
agacaaaggagagctcctcatcgtcatcctcaaaccaacttgagggatggagaagaagaa
gaagaagaagaagaaacacatcatcaagaagaagatgatgaaagcgttgataatggcggc
aatggagagaaggctgatcttgatctcgcgggaccctctagaaatggacccttttctgtg
accgtaactgaccctgaagtttttgactgtcccatttgctatgagtcattgaccgctcct
gttttccagtgtgaaaatgggcatatagcttgctctacctgctgctccaaaattatgaat
aaatgtccatcttgttgtacgcctattggctacaaccgttgcagggccatcgagaaagtt
ttagaatctgttaaagtaacatgtcggaactcaaattatgggtgtaaagtaacaatgagt
tatgggaagaaacatgatcatgagaagatttgcccccatgtgccatgttcttgccccatt
ccagactgcaactttgttggttcagccaaccatttgtacaaacactttagtgctaaacat
aaaaattctgcattacattttctgtacaatgaagttgtagaggttaccttaaatgttaac
aacagatttattgttcttcaagaagagggagatggtgtactgtttattctcagcagtagg
tctgaaactcttgggcatgtaatatcagttagctgcattgcacccttgtgcaagggatgt
ctcttctacagtatttttgcaggacctgctggaagcacggttagatttcaatcttttaca
aagaacattcaaaatcgagttgataaccctccttcaacaggattcctactagttccaatt
gaatcctttggttcttcgggagacctcaagttggaactttgtatacggcggcttgatata
tctcttcagcatgtttcaagagttgtcgtgtaa
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