KEGG   Citrus sinensis (Valencia orange): 102613880
Entry
102613880         CDS       T02983                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102613880
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cit01002]
    102613880
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102613880
   03036 Chromosome and associated proteins [BR:cit03036]
    102613880
Peptidases and inhibitors [BR:cit01002]
 Metallo peptidases
  Family M1
   102613880
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102613880
   Coactivators
    SAGA/TFTC/STAGA complex
     102613880
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     102613880
SSDB
Motif
Pfam: TPR_TAF2_C TAF2_3rd Peptidase_M1 HEAT_2
Other DBs
NCBI-GeneID: 102613880
NCBI-ProteinID: XP_006485746
UniProt: A0ACB8LY80
LinkDB
Position
3:join(9220392..9220507,9220616..9220955,9221600..9221745,9221845..9221911,9225167..9225366,9225487..9225640,9225863..9225947,9226071..9226162,9227678..9227803,9227894..9227947,9229175..9229240,9230309..9230406,9230501..9230848,9230927..9231014,9231459..9231584,9231672..9231728,9232304..9232383,9232470..9232512,9233714..9233800,9236344..9236433,9237360..9237418,9237500..9237590,9237672..9237837,9237972..9238155,9239374..9240475)
AA seq 1354 aa
MAKPRKPKNEETKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENL
GIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNL
LINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGIHFDGNALHTD
NQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLD
VPVSAKWITLAVAPFEVLPDHHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKF
PFGSYKQVFLAPEMAVSSSTFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGV
YITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANCAVCKADDSGATALSSSA
SCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLST
KEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPD
SRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLA
ARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW
INQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS
EETDWAGLLHLVKFYKSRRFDENIGLPRPNDFHDFSEYFVLEAIPHAVAMVRAADNKSPR
EAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLSSLLKRIDRLLQFD
RLMPSYNGILTISCIRTLTQIALKLSGFISLDQVVKLIKPFRDFNTIWQVRVEASRALLD
LEFHCNGIDSALSLFIKSVEEEPSLRGQVKLGIHAMRICQIKGGSDSNHEVDTVTLVALL
NLLESRISFNNVFLRHHLFGILQILAGRAPTLYGVPRDKLLLLGDGETSEQKNVFASFVT
EMRRAEPPMDVPNLSQDNLAVRDASKEVDCVANGHAENILAVPEASKDADVISNSHERKM
AVPEASKEAETVSNSYERKLPVVKIRVKQSTATSRADEADNRTIEKSQGGNHENDRGASS
SVSVDAPQRNSAEAVSFSNHNIEEVNSCHDHGSRMTASIGSAKLPSEGDNFGKELQCTAD
SSKVSMHLQPDDPSSPSIMQDNNVDADAQKFASLQTLSVARHDLNGKEKKEKKDREKKRN
REDPDYLEKKRLKKEKKRKEKELAKLLGDEAKAPSVELAAKKEESNIKNATAQLKPFEPS
GSKVTISKVAAKPEPSEGSPAPKFRIKIKSRTQN
NT seq 4065 nt   +upstreamnt  +downstreamnt
atggcgaagcctcgtaagccgaagaacgaggaaacgaaggttgagaattccggcgccgtc
gtgcgtcaccagaagctctgcctctcaatcgacatggagaagcaccaaatctacggctac
accgagctggagattgcagtaccggatatagggattgtagggttacatgcggagaatttg
ggaattgagagcgtgttggttgacggagagcctactgagttcgaatattatccgcataat
catcaaaatgtggaaaatgaaaagagatggagatccatggtctcgtcgccgagttctgct
gcagatgctgcagctgctgtgtacatatcggctctggaaagagaattagttcctaatttg
ctcatcaattgttgcaagccgttcaagggtttaactgatcagatagaacaaatgaatttg
gagaataagttggattcctctgctgaacctaagcagaatgtgaaattggttcgtattgac
tattgggtcgagaaagtagaggttggaattcattttgatggtaatgcattacacactgat
aatcagataaggcgagcacggtgctggtttccttgtatagatgacaccacccaacgatgc
tgttatgatctggagtttacagtctcccaaaatcttattgccgtcagtgctggaagctta
ctatatcaggttctgagcaaggatgatcctcctcgcaaaacatacgtctacagattagat
gttccagttagtgctaagtggataactttggcagttgcaccctttgaagtccttcctgac
caccatcagagtctcatgtcacacatatgtttgccagctaatgtatcaaagattcataat
actgtggagtttttccacaatgcattcagccattatgagacataccttgatgcaaaattt
ccatttggatcatacaagcaagtttttttagctcctgagatggcagtatcatcgtccact
tttggagctgcgatgggcatctttagctctcagattctgtatgatgagaaagttatcgat
caggccatagacactagcattaaactttcatttgcccttgcaagacagtggtttggagta
tatatcactcctgagttaccgaatgatgagtggctgctggatggtcttgctggttttcta
acagattcatttatcaagaaatttttgggaaataatgaagctcgttatcggagatacaag
gcaaattgtgctgtttgcaaagcagatgacagcggtgcaacagctttaagctcttctgct
tcttgtaaggatttgtatggaacacaatgtatcggtatatttggcaagattcggtcatgc
aagtctgtggcaatccttcagatgttggaaaagcaaatgggttccaatttcttccgaaaa
attttgcagaatatcatttctcgggctcagggtgcatctcctgtgagaactcttagtaca
aaggagtttcggcattttgcaaataaggttgggaaccttgagcgtccattcctcaaggag
ttttttccccgttgggttggaacgtgtggctgcccggtgctaaggatggggttttcatat
aacaaacggaaaaatattgttgaactggcggtgttgcgggattgcaccgttaaacctgac
tcaaggactcctgttcttagttctaataccgattctgaaaaccgagatggtgatattgga
tggcctgggatgatgagcattagagttcatgagcttgatggtatgtatgaccatccaatt
ctgccaatggctggagatgcatggcagctactggaaatacaatgccattcaaagctggct
gcgagacgtgccttgaagcctaaaaagggttcaaaacctgacggctgtgatgataacggt
gatgctgttgccggtttagacatgcgctccagcatggaatctccattgtcatggattagg
gcagacccagaaatggaatatctggctgaaattcattttaaccagcctgtacagatgtgg
ataaatcagttagagaaggatggagatgttgttgctcaggcacaagcaatcgcagctcta
gaagctctgccccatctttctttcaatgttgttaacacactgaataatttcctcagtgac
tccaaggccttttggagagttcggattgaggcagcatatgctttggctaatacagcatct
gaggaaactgattgggctgggttgcttcatctagtgaaattttataaaagtcgaaggttt
gatgagaatattggactccccaggccaaatgatttccatgatttttcagagtattttgtt
cttgaggctattccacatgccgttgccatggttagagctgctgacaacaaaagcccaaga
gaagctgtcgagtttgttttacagcttttgaagtataatgataataatgggaatccctac
tcagacgtattctggcttgctgcgctggtccagtcagttggtgaacttgagtttgggcaa
cagagtattctctttttatcatctcttctcaagcgtattgatcgacttttgcagtttgac
aggctcatgccaagttacaatgggatcttgacaatcagctgcatccgaacgttgactcaa
attgcgttaaagctatctggattcatctctcttgatcaggttgttaaacttattaaacca
tttagggatttcaatactatatggcaagttcgagttgaggcgagcagagcactccttgat
cttgagttccactgcaatggcatagattcagcattgtcattgtttatcaaaagcgtagaa
gaagaaccgtcgttgagaggacaggtgaaattgggtattcatgctatgaggatatgtcag
ataaaaggtggatcggattccaatcatgaagttgatacagtaactctagtggctttgctg
aatttgcttgaaagtcgtatatcattcaataatgtattccttcgtcatcacttgtttggc
attttacaaatccttgcaggaagagcccccacgctttacggagtgcccagggataaattg
ttgcttctgggtgatggagaaactagcgagcagaagaatgtttttgcatcttttgttacg
gaaatgagacgtgcggaacctcctatggatgtcccaaacctttcacaggataatttggcc
gttcgagatgcttccaaggaggtagattgtgttgccaatggtcatgctgagaatatattg
gctgttccagaagcttcaaaggatgcagatgtcatttccaacagtcatgaacggaaaatg
gcagttccagaagcctcaaaggaagcagaaactgtttccaacagttatgaaaggaagctg
ccggttgttaagattagggttaaacaatctactgcaactagtagagcagacgaggctgat
aatagaaccattgaaaaatctcaaggtgggaatcatgaaaatgaccgtggcgccagtagt
tctgtttctgtcgatgcaccccaaaggaattcagcagaggcagtgagctttagtaatcac
aatatcgaagaagtcaattcatgtcatgatcatgggtcacggatgactgctagcattggc
agcgcaaaacttccaagtgaaggagataatttcgggaaggaactccagtgcactgctgat
tcaagcaaagtttctatgcacctgcaacctgatgacccatcgtcgcctagcatcatgcaa
gataacaatgtcgacgctgatgctcaaaaattcgcaagccttcaaaccctctctgttgca
agacatgatttgaacggcaaagaaaagaaggagaagaaagacagagaaaagaagcggaac
agggaagatccagattatttggagaagaagcgtctaaagaaggagaagaaacgaaaggag
aaagagttggcgaagctgctgggtgatgaggcaaaggcgccttcagtagagttggctgcc
aagaaagaggaatccaacattaagaatgcaaccgcacaattaaaaccatttgaacccagt
ggatcaaaagtaacgatctcgaaggtagcagccaagcctgagccatcagaaggcagtcct
gcccctaaattccgaattaaaattaaaagtagaactcagaattaa

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