Citrus sinensis (Valencia orange): 102613940
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Entry
102613940 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102613940
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102613940
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102613940
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102613940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-RING_13
Motif
Other DBs
NCBI-GeneID:
102613940
NCBI-ProteinID:
XP_006473244
LinkDB
All DBs
Position
5:join(35330488..35330578,35330714..35330919,35331769..35331870,35332503..35332554,35332638..35332750)
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AA seq
187 aa
AA seq
DB search
MEGPPCGDVCSVCHGNFNVPCQANCSHWFCGNCIMLVWDHGSTLQACRCPLCRRRITLLI
PNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGLFQRIQDLPFLLRRLVRELVDPHR
SLPLVIRARVYIAMIFSAVYIFSPIDIIPEALLGIVGLLDDLLIALLCFLHVAALYRAVL
YNRHGGA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcctccatgcggcgatgtctgctcggtgtgccatggaaacttcaacgttcct
tgccaagcaaattgctctcactggttttgcggtaactgtattatgctggtatgggatcat
ggatcaacacttcaagcatgtagatgccctctgtgtcgtcgtcggattactttgttgatt
cccaatgatgattcattaagacaacgccatgatcctgccgttggtgatattcttcaaaag
gttgaatcctacaatcgtatttttggtgggcccacaactgctaatggtctcttccagaga
attcaagaccttccttttctactgcggagattggtgcgggaactggtggatcctcacaga
tcgcttcctcttgtcatcagagcccgtgtttacattgcaatgatattcagtgctgtctac
atattcagccctatagacattattccagaagcgcttttgggaatagttggcttattggat
gatctcctaattgcgctcttgtgctttctccatgttgctgccctctatcgagctgtcctg
tataatcgtcatggcggggcatga
DBGET
integrated database retrieval system
