KEGG   Citrus sinensis (Valencia orange): 102613961
Entry
102613961         CDS       T02983                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03020  RNA polymerase
cit03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102613961
  09124 Replication and repair
   03420 Nucleotide excision repair
    102613961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102613961
   03400 DNA repair and recombination proteins [BR:cit03400]
    102613961
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102613961
  RNA polymerase III system
   RNA polymerase III
     102613961
  RNA polymerase I system
   RNA polymerase I
     102613961
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102613961
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 102613961
NCBI-ProteinID: XP_024953964
LinkDB
Position
3:complement(join(36471800..36471911,36472080..36472174,36472553..36472710,36473028..36473085))
AA seq 140 aa
MQDTFIVGKINPDGKKFDSVSRIEAEGESLEMLMTLDVNTDVYPIKENEKHVVLLTSTLN
KDGSAVGDYYTQTGRDSIADKFDYIMQGKIYRISEEGSGANVKAEIYVSFGGLLMLLKGN
PSYVSEFDLDQRLFLCMRRL
NT seq 423 nt   +upstreamnt  +downstreamnt
atgcaagatacgttcatagttggcaaaatcaatccagatggaaaaaaatttgactccgtt
tctcgtatagaagcggagggtgagagcctcgaaatgctaatgacactcgatgtcaatact
gatgtttatccaattaaggaaaatgaaaagcatgtggttttgttaacttctacattaaac
aaagacggctcagctgttggtgattattacactcagactggcagggattcaatagcagac
aaatttgattatatcatgcagggaaagatatacaggatctcagaggaaggttcaggcgca
aatgtaaaagcggagatatacgtatcatttggtggccttctgatgttgctgaaagggaat
ccttcgtatgtttcagagtttgatcttgatcaaaggctgtttctctgcatgaggagactg
tga

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