KEGG T02983: 102614049

Citrus sinensis (Valencia orange): 102614049

Entry

102614049         CDS       T02983

Name

(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X1

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

cit Citrus sinensis (Valencia orange)

Brite

KEGG Orthology (KO) [BR:cit00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cit03032]
    102614049
   03400 DNA repair and recombination proteins [BR:cit03400]
    102614049
Enzymes [BR:cit01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     102614049
DNA replication proteins [BR:cit03032]
Prokaryotic type
  DNA Topoisomerases
   102614049
DNA repair and recombination proteins [BR:cit03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      102614049

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook TOPRIM_C HATPase_c_3

Other DBs

NCBI-GeneID:

102614049

NCBI-ProteinID:

XP_006477492

LinkDB

Position

9:join(13686039..13686139,13686309..13686456,13686541..13686621,13686731..13686844,13687846..13687902,13688553..13688654,13689213..13689363,13689468..13689544,13689762..13689872,13692584..13692654,13692901..13693042,13693941..13694039,13694147..13694275,13694429..13694543,13695686..13695753,13696743..13696856,13696950..13697066,13697169..13697222,13697308..13697413,13698343..13698473,13698856..13698924)

AA seq 718 aa
MARLLLKAPYLHIRVLMASRCFCSFSSSLFFKPRTNFAIRGVSSQVLTRSNVVLPRAFLS
SSIATEAFKENPVSKTYGSEQIQVLEGLEAVRKRPAMYIGSTGPRGLHHLVYEILDNAVD
EAQAGYASNIEVALLADNSVSVADNGRGIPIDLHPATNKSALETVLTVLHAGGKFGGSSS
GYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQ
GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFA
GGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG
THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTR
LGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLR
SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEA
AMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQK
TLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV
QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI

NT seq 2157 nt +upstreamnt +downstreamnt
atggcgcgtcttcttctgaaagctccttatcttcatattcgcgtgctcatggcctctcgt
tgtttctgctcttttagctcctctctcttttttaaacctaggacaaattttgcgataaga
ggagtttcgagtcaagttttaactcggagcaatgtggttttaccgagggcattcttgtcg
tctagcattgcgacagaagcttttaaagaaaatcccgtctctaagacctatggctccgaa
caaattcaggtgcttgaaggtttagaagctgttagaaaacggccagcaatgtacattgga
agcacaggccctcgtggtttgcatcatttggtgtatgaaatattggataatgctgtcgat
gaggcccaagcaggatatgcttcaaacatagaagttgctttgcttgcagataattctgtg
agtgttgctgacaatggtcgtgggattcctattgacttgcatccagccacaaacaaatct
gccttggagactgtattaacggtcttacatgcaggtggcaaatttggtggttctagtagt
ggttacagtgtatctggcggattacatggtgtgggtttatccgtcgttaatgccttgtct
gagtcattagaagttacagtttggcgcgatggaatggaataccaccagaaatattctcgc
gggaagcctgtgacaactctgacatgtcatgtccttccagttgattcaaaggatcgccaa
gggacacgcataagattttggcctgataaacaagtattcactactgctattcagtttgac
cataatacaatagctggaagaattagggagcttgctttcctaaaccctaagcttactatc
gctcttaggaaagaggacagtgatccagagaaaaaccagtataatgaatatttctttgcc
ggaggtttggaggaatatgtacaatggctcaataccgataagaaaccacttcatgatgtt
gtgggcttcagaaaagatgtagatggaatcacaatcgatttagctctccaatggtgttcg
gatgcatattcagatactatgttgggatatgcgaatagcatacgtaccattgatggtggc
acccatatagaaggggtgaaggcttcattgacaagaactctcaacagtcttggaaagaag
tcaaaaactgtcaaggataaggatattagtttaagcggtgaacatgttagagagggactg
acatgcattatctcagtgagagttccgaatccagaatttgaaggacaaacaaagacaagg
ttaggaaatccagaggtgcggaaagtggttgatcaatctgttcaggaatatcttactgaa
tacttagagttgcatccagatgtacttgattcaatcctttccaagtctctgagtgcgctt
aaggcagctctggcagcaaagagggcaagggacttagtgagacaaaagagtgtgctgaga
tcttcatcgcttccaggaaaattggcagattgctcgtctacaactcctgaagaatctgaa
atttttattgttgaaggcgattctgctggtggaagtgcaaaacaaggacgtgatagacgt
tttcaggctattcttccgctgagaggtaaaattttaaatgttgaaagaaaggatgaggca
gcaatgtacaagaatgaagaaattcagaatctaattcgtgctcttggacttggagtaaag
ggagaggattttaaaaaagaggctctgcgttatcataagatcatcatattaacagatgct
gacgtcgatggtgctcacatccgaacactgttattgacatttttctacagatatcagaaa
accttatttgatgaaggttgcatttatgtcggtgttccacccctctacaaggttgagagg
ggaaagcaagtacagtactgctatgatgatgcagagctaaagaaggtcaagagctccttc
ccttcaaatgctttgtatagcattcagaggttcaaaggcctgggagagatgatgcctgtg
cagttgtgggagacaacattgaacccagagcaaagaatgcttaagcaactggtgattgag
gatgcagcagaagcaaatgttgttttctcctccctcatgggggccagggtggacactcgg
aaggaactcatccagaatgctgcaaacctcgtaaacctggatcatcttgatatttag

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