KEGG   Citrus sinensis (Valencia orange): 102614855
Entry
102614855         CDS       T02983                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102614855
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102614855
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX DEAD zf-C3HC4 zf-C3HC4_2 zf-RING_2 Prok-RING_4 ResIII zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 102614855
NCBI-ProteinID: XP_006484966
LinkDB
Position
8:complement(join(25859406..25859528,25859777..25859875,25860476..25860547,25860634..25860727,25861437..25861637,25861786..25862064,25862376..25862488,25862588..25862687,25862771..25862893,25863616..25863683,25864807..25864962,25865061..25865207,25865356..25865628,25865725..25865809,25865893..25866044,25866133..25866279,25866356..25866409,25866619..25866760,25866957..25867090,25867330..25867821))
AA seq 1017 aa
MGTKVTDEVLSTVRSVVGPEFSNMDIIRALHMANHDPAAAINIIFDTPNFKTPEIKPLAA
RRKLIISKENEIRASSENGTLAEAIAEGYSEGSEWWFVGWGDVPAMSTSKGRKLRRGDEV
TFTFPLKSFNSLSSKFPSKSFVRARQAVVPCSEIVRFSTKDAGEIGRIPHEWSRCLLPLV
RDKKVEILGCCKSAPEVLGIMDTIVLSIRVYINSSMFRKHHATSLKAGSNSAEDSVSLCH
PLPNLFRLLGITPFKKAEFTPSDLYTRKRPLDSKDGSGLHASLLHANKSKVQSAKVNDVD
DVEPISDSDVDNIVGVGYSSEIEEMVPPSTLKCELRPYQKQALHWMVQLEKGRCLDEAAT
TLHPCWEAYRLLDERELVVYLNAFSGEATIEFPSTLQMARGGILADAMGLGKTVMTIALL
LTHSQRGGLSGIQSASQPSDGGIEGYDISDQSPNLMKKEPKSLSIDKLIKQANTLINGGT
LIICPMTLLGQWKAEIETHAQAGSLSVHVHYGQTRQRDVNVLAQSDVVITTYGILSSDFS
SENSEDYGGLYSVQWLRVVLDEAHTIKSSKSQVSIAAAALVADYRWCLTGTPIQNNLEDI
YSLLRFLRVEPWGNWAWWNKLIQKPYEEGDERGLKLVQSILKPIMLRRTKSSTDREGRPI
LVLPPADMQVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQC
CDHPFLVMSRGDTQDYSDLNKLAKRFLKGSSNALEGEDKDVPSRAYVQEVVEELQKGEQG
ECPICLEAFEDAVLTPCAHRLCRECLLGSWKTPTSGLCPVCRKTISRQDLITAPTGSRFQ
VDIEKNWVESTKIAVLLKELENLCLSGSKSILFSQWTAFLDLLQIPLSRNNIPFLRLDGT
LNQQQREKVLKQFSEDNNIMVLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRI
HRIGQTKRVTIRRFIVKGTVEERMEAVQARKHRLIAGALTDQEVRSARIEELKMLFT
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgggaaccaaagttaccgacgaagtgttgtccactgtccgatcggtcgtgggcccggaa
ttctccaatatggacataatcagggccctacacatggccaatcacgaccccgctgccgcc
atcaacatcatcttcgacactcccaatttcaaaacccctgagattaagccattggctgca
agacggaagctgataatcagtaaggaaaacgagatccgtgcttctagcgaaaatggtaca
ttagctgaggccattgctgaaggttacagtgaagggagcgagtggtggttcgtggggtgg
ggtgacgtgccggcaatgtccacgagtaaagggagaaaattgaggcgtggggatgaagta
acgttcacattcccgttgaagagttttaatagtttgagttctaagttcccaagtaagagc
tttgtgagggcgaggcaagcagtggtgccctgttcggagatcgtgagattttcgaccaag
gatgctggagaaattggtcgaatacctcatgagtggtctcggtgtttattaccattggtg
agggacaagaaggttgaaattcttgggtgttgcaagtctgctcctgaagttctgggcatt
atggataccattgttttgtcaataagagtgtatatcaatagttctatgttccgtaagcac
catgcaacctcacttaaggcaggtagcaattcagctgaggattcagttagtctttgtcat
cctcttccaaatttgttccggttgcttggcataactcctttcaagaaggcagaatttact
cctagtgacctgtacacaaggaaacgacctttggattcaaaggatggttctggccttcat
gcctcgttgttacatgccaacaagtctaaggttcagtctgcaaaagtaaatgatgttgac
gatgtggagcccatttcagattctgacgttgacaatattgttggcgttggatacagctca
gagatagaggaaatggtgccgccgagtactcttaagtgtgaacttcgtccctaccaaaag
caggcccttcattggatggtccagttggagaaggggcgatgcctggatgaggcggcaaca
actcttcacccatgttgggaggcataccgcctattagatgagagggagcttgtagtttat
ttaaatgcattttctggcgaggctacgatagaattcccaagcactcttcaaatggccaga
ggaggaattctggcagatgcaatggggctcggaaagactgtcatgaccatagcactccta
ctcactcattcacaaagaggtggactttcaggtattcagtcagcaagtcagccttctgat
gggggcattgaaggctacgatatttcagaccaatcgccaaatctcatgaagaaagaacca
aaatctttgagcattgataaattgataaagcaagctaatacacttataaatggtggcact
ttgatcatatgtcctatgactcttctgggccagtggaaggctgagattgaaactcatgca
caagctgggtctctctctgttcatgttcattatggacaaactagacaaagggatgtgaat
gttttagctcagagtgatgttgtaattactacgtatggaatactatcctcagatttctca
tcagagaattccgaagactatggtgggctttactcggttcagtggttgagagttgttctt
gatgaggcgcacaccataaaatcatctaaaagccaagtttccattgctgctgctgctctt
gttgctgattaccgctggtgtctcacaggcactcctattcagaacaacttggaggacatt
tacagtcttcttcggttcttaagggtggaaccctggggaaactgggcatggtggaataaa
cttattcaaaaaccatatgaggaaggtgatgagagaggtttaaagttagttcagtctatt
ttgaagccaatcatgttaaggagaacaaaatctagcactgatagagaaggcaggccaatt
ctagtcctccctccggctgacatgcaggtgatttactgtgagctcacagaagctgagaaa
gacttctatgaggccctctttaaaagatccaaggtgaaatttgaccaatttgttgaacaa
ggacgggttcttcataattatgcctctatattggagttacttttgcgtcttcgccaatgc
tgtgatcatccattccttgtaatgagtcgaggtgatactcaagattactcagatctaaat
aagctagccaaacgtttcctgaaaggcagctctaatgccttggaaggggaagacaaagat
gtgccctcacgggcttatgtacaagaggttgtggaggaattacaaaaaggagaacaggga
gagtgtccgatatgccttgaagcatttgaggatgcagtgttgacaccgtgtgctcaccga
ttatgccgagaatgcctgttgggaagttggaaaactcctacttctggtttatgccccgtc
tgcaggaagaccatcagtaggcaagatcttattacggccccaactggtagtcggttccaa
gttgatattgagaagaactgggtggaatctactaaaattgctgttctcttgaaagaactg
gaaaatttatgcttatcaggttccaagagcattttatttagccagtggactgcctttttg
gacctcttacaaatccctctttctcggaataacattccatttcttcgcctggatggaact
ctaaatcagcaacaacgagaaaaagtactaaaacaattttcagaagataacaacatcatg
gtattgcttatgtcattaaaggctggtggtgtgggaattaacctaacagcagcttccaat
gcttttgtcttggatccatggtggaatccggctgtggaggagcaagctgttatgcgtatt
catcgtattggacaaactaagagggtgacaattagacggttcattgtcaagggaacggtt
gaagaaagaatggaagcagtgcaagcacgcaagcacagattgatagctggtgcattgact
gatcaagaagttagatctgcacgaattgaggaactaaagatgctttttacttga

DBGET integrated database retrieval system