Citrus sinensis (Valencia orange): 102614875
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Entry
102614875 CDS
T02983
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102614875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102614875
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102614875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
102614875
NCBI-ProteinID:
XP_006466667
LinkDB
All DBs
Position
7:join(2970221..2970579,2970809..2970923,2971529..2972002,2972503..2973013,2973968..2974008,2974216..2974254)
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AA seq
512 aa
AA seq
DB search
MNLPKQQPRAGFEEGVFSISSPIQYPTMSFSLFSTPQQQQPQSLFQPQQQQQQQQQNPFQ
SSPLFSQQQQQQQFLPQQQQQQQPQQQHLFLFTNDRAPANYSTKWADLHPDSQKILLQIE
ERVLEYRDESQRLDQCSRLYDSSVSNEGFELDASHIVQELGGISTSMERQKAQLQERMAV
VKDMLRNTEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPV
FDFYRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLP
QVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRRGDGSDPFLEADRRETARQEAAA
KRVHPTLHLPVNSQPSAQVGGSLTNTATGALVAPQTSAVISASSGGGLSLFSTPSSAPAS
SMSSSLFATPATSASPSSLFGSGVSPQMSSSSLFAASTLSLFGSTVPSFGSTTSAGASLF
STPFASGAPSGSGASFGAASKSTRPKTRTARR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcccaaaacagcaaccaagggcggggtttgaagagggggttttttcaatttct
tccccaattcaataccctacaatgtcgttttcactgttttcgactccacaacaacagcaa
ccccagtcactcttccagccccagcagcagcagcagcagcaacaacaaaacccttttcag
agcagcccacttttttcgcagcagcagcagcagcaacagtttcttccacaacagcaacaa
cagcagcagccgcaacaacagcatttgtttcttttcacgaatgacagagctccggcgaac
tatagtaccaaatgggcggatcttcacccggattcgcaaaagattcttcttcaaatcgag
gagcgggttttggagtacagggatgagagccagcggctagatcaatgtagtcgcctttat
gattcttcggtttccaatgaagggttcgagctcgatgcaagccatattgtccaagaactt
gggggaatcagtacttccatggaaaggcagaaagctcagttgcaagagcggatggctgtt
gttaaagacatgttgcggaacacagagatagctgttcgttctttcatgatgctgcgccct
aggtttctacatcctaatgcaggaagtgcttcaagtgctactgcaccatcccaggcttcg
ggagcaacagcagcaccttcttccactggtcaaccagcaagtagctctgtagttccagtg
tttgacttttaccgaggacttccaaagaaaccatcagcttttttgcagcaaacagttgcc
agatttgagaaatatctgggtgagttccgccaatggattgaagagttagagcaactgatt
cttctagacccagataggaactcttccagccacggatcctctttactgcagtctctacct
caagtcatatcaaacgtgcatatcttttttgttcacgtggctgccaaggcggagagcatt
catcaatatgttgaaactatgaaaacagcttatctcgctgaccagcgtcgacgaggagat
ggtagtgacccgtttcttgaggctgatcgacgagaaacagccagacaggaagccgctgct
aagagggtacatccaactttgcatttgcctgtaaattcacaaccatcagcgcaagttggt
gggtcgctcacaaacacagctacaggggcattggtcgccccacagacatcagcggtgata
tcagcttcttcaggaggtgggctctctctttttagcacaccgtcttctgctccagcttcc
tctatgtcgtcttctctgtttgcaacaccagccacctctgcttcaccttcctcattattt
ggatctggtgtatcaccacaaatgtcatcatcatctttatttgctgcatcaactctgtct
ttgtttggtagtactgttccatcttttgggtctacgacatctgctggagcatcacttttt
tcaacaccatttgcatcaggtgctccatcaggatctggggctagctttggggctgcatct
aaatcaacaaggccaaaaactcgaactgcccgacgctaa
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