Citrus sinensis (Valencia orange): 102614891
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Entry
102614891 CDS
T02983
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102614891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102614891
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102614891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
102614891
NCBI-ProteinID:
XP_006469525
LinkDB
All DBs
Position
2:complement(join(20558425..20558438,20560608..20561817,20562163..20562384))
Genome browser
AA seq
481 aa
AA seq
DB search
MQSDNGKLFIGGISWDTNEERLKEYFSTYGEVVEAVIMKDRNTGRARGFGFVVFADPAVA
EIVIQEKHNIDGRMVEAKKAVPRDDQIVLNRSSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPTRSPLGGYHYGLSRVNSFLNGYTQGYTPSTVGGYGLRMDGRFSPVAGGRS
GFPPFGSGYGMGMIEPGLNPSFGANANFNSNLSYGRGLSPYYIGNPNRYGSPLGYDGGNG
GNTSFFSSVTRNLWGNGGLNYNSNSASSNAYMGSGSGTIGGNTFGNTGVNWGSSAISAQG
GGNNVSNSNANFGYGSGDNSFGLGAGGYGRNPGTTLAQSSSFAASNGGYDGVFADLYGTG
GGSGSVYGDPTWRSSSSERDGSGSFGYGLSSGTADVSAKNSPGFVGGYSVNKRQSNRGIA
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgataatggaaagttatttattggtggaatatcttgggacaccaatgaggag
cgtctcaaggagtactttagtacttatggtgaggtggtggaggcggtgatcatgaaggat
cggaacacagggcgtgcccgtggatttggctttgttgtctttgctgatcctgctgttgct
gagattgtcattcaggaaaagcacaacattgatgggagaatggttgaggcaaaaaaggct
gttcctagggatgaccagattgtgctcaatagaagcagtggcagcattcatggttctcct
ggtccaggccgcacacgaaagatttttgtaggaggtttagcatccaccgtcacggaaagt
gactttaagaagtactttgatcagtttgggactatcacagatgttgtggtgatgtacgac
cacaacacccagaggccaagaggctttggtttcattacttatgattcagaggaggcagtg
gacaaggtattgcttaagacttttcatgaattgaatggaaaaatggttgaggttaagaga
gcagttcccaaagagctatcacccggtcccactcgcagcccgcttggaggatatcactat
ggtctaagtagggtcaatagtttccttaatggttacactcagggatatactcctagcaca
gttgggggctatggacttagaatggatggtagattcagtccagttgctggtggacgaagt
gggtttcctccgtttggttccggttatggaatgggtatgattgagccaggattgaaccca
agttttggagctaatgcaaattttaacagcaatctcagctatggaaggggtttgagtcct
tattatattgggaatccgaataggtatggtagtcctcttggttatgatggaggtaatgga
ggaaacacttcctttttcagctcagtcaccagaaatttgtggggaaatgggggccttaac
tataactcgaacagtgctagttccaatgcatatatgggatcgggaagtgggaccattgga
ggaaacacctttggcaatactggagtcaattggggttcttcagcaatttctgctcaaggt
ggaggtaataatgtttctaacagtaatgctaattttgggtatggaagtggagataacagt
tttggcttgggggccggaggatatggaagaaatcctggaactactttggctcaatcatca
tcatttgcagcttcaaatggtggttatgatggagtctttgcagacctatatggcactggc
ggcggtagcggttctgtttatggggatccaacatggagatcatcatcatctgaacgagat
ggttcaggttcttttggttatggactcagtagtggcactgccgatgtttcagctaaaaat
tctcctggttttgttggtggttatagtgttaataagagacagtcaaatagaggaattgct
acctag
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