Citrus sinensis (Valencia orange): 102614939
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Entry
102614939 CDS
T02983
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102614939
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102614939
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102614939
NCBI-ProteinID:
XP_006480722
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All DBs
Position
6:join(12880170..12880449,12881039..12881390,12881478..12881688,12881800..12881868,12883057..12883292,12884657..12884693)
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AA seq
394 aa
AA seq
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MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHV
DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTI
HLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKS
KHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIH
HCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKY
LTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLK
QVLQHCTGWQDIQRPADQPVAAQHQTRRRRELIA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactcacacgggcatcatcatcatcaccgtaacgaagctaacagttacttccca
caccaaacgcctactcctacccctccgccctttaaatttggcccgtctgatcatcatcaa
catcaacctgcagcacaatttcagaacaactcgacgatgtcattgccttacgctcacgtt
gattgcagcttacgtgctctcgccggccaggccgaagggttcggtcgcctcgccattggc
ggtctccacggacccctctaccacgtcaccactttagctgatgacgggccaggatcactt
cgagaaggatgccgcatgaaagaacctctttggattgtctttgaagtgtcaggcaccatt
catctccgctctcacttgagtgtctcatcttacaaaaccatagatggccgaggacaaagg
gtgaaacttacaggaaagggtttgaggctgaaggaatgcgaacatgttataatatgcaat
ctagagtttgaaggtggtaaaggacctgatgttgatgccattcaaataaaacctaagtca
aaacacatatggatagaccgttgtagtctccgtgattatgatgatgggctgatagatatc
accagagaaagcacagatattacagtttctaggtgtcacttttcatcacatgacaagacc
atgctcattggagcagatccctctcatgttgctgatagatgtattcgagtgaccattcat
cattgtttttttgatgggactcgacaacgacatccacgtgttagatatgctaaagtacat
ctgtataacaattacaccagaaattggggaatttatgctgtttgtgccagtgttgattca
cagatatactcccaatgtaatatatatgaagcaggacagaagaagatggcattcaagtat
cttacagagaaggcatcagacaaggaggaggcaagatctggttgcataaggtctgaaggg
gatttgttcatcactggaactcaagctgggttgatgactgaggctggtgaacatagcatg
tttcaccccagtgaatactaccccacttggactgttgctgctcctaccgataatctcaaa
caggttcttcagcattgtacaggatggcaagacattcaacgcccagcagatcaaccagta
gctgctcagcatcagacaaggaggaggcgagaactgattgcataa
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