Citrus sinensis (Valencia orange): 102614962
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Entry
102614962 CDS
T02983
Name
(RefSeq) periodic tryptophan protein 2
KO
K14558
periodic tryptophan protein 2
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102614962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102614962
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102614962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Utp12
WD40_Gbeta
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_NOL10_N
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_HPS5
DSE1_N
PAC11
Beta-prop_VPS8
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_SCAP
ASA1
eIF2A
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_DCAF4
WD40_like
WDR54
WD_LRWD1
Utp21
Tricorn_2nd
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
102614962
NCBI-ProteinID:
XP_006465380
UniProt:
A0ACB8JC97
LinkDB
All DBs
Position
7:join(11088328..11088664,11089132..11089988,11090631..11090882,11090974..11091066,11091305..11091676,11092688..11093032,11093304..11093531,11093620..11093790)
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AA seq
884 aa
AA seq
DB search
MNYRFQNLLGAPYRGGNAVLSQNTKLISPVGNRVSVTDLIKSKTVTLPVESSSNICRIAV
SPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWR
SPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTN
KPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPP
SPGTPEMEREGKKRKDFDGKDEELGEQQEYLHKQKWGLLRKDDFSQAPSKVTACDYHRGL
DMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW
RSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTA
LHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS
FEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSGESF
PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAA
NSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNS
KNMTEAGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNHGRPTIRTKCLKIAPTGRN
FVAATTEGVLVYSIDESFIFDPTDLDIDVTPEAVDAALNEDQPNRALILSLRLNEDNLIK
KCIFAIRPVDIPAVASSIPYRYMQRLIEALSDLLESCPHLEFMLRWCQELCKTHGNTIQQ
NSRNLLPSLKSLQKSITRIHQDLADTCSSNEYMLQYLCSVGAKK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccgctttcagaatctcttgggcgcgccctacagaggtggcaacgctgtctta
tcacagaacacaaagctcatttcaccggttggtaaccgagtgtctgtcacagacctaata
aagtccaaaactgtgacgcttcccgtcgaatcatcgtcgaacatctgtcgcatcgccgtc
tcaccggacgggacttttctgttgaccgtcgatgagaaccagcgatgccattttatcaat
cttcactgccacgttgttcttcatcgtgttagattcaaatatcccgtaaatgccatcctg
tttagtcctaatggcaagtacatcgccgtcggtacaggtaaactggtgcaaatatggaga
tcacctgggtttaagaaggaagtgtttgctttcgagttaataaggactttggctgattgc
aatgacaaagttactgcattgaactggagtcctgattctaattatttgcttgttggttca
aaagatttggctgtgaggttgttctatgtaaaagaaaaattaaagggcattcataccaat
aagccgtttttacttttaggccatagagattcagttgtgggttgctttttcagtgttgat
aaaaagactgataaggtaaataggatttacacaattgctcgtgattgttacatgtttagt
tggggttttagtggcaatgatggaaaaattgatgaaactatggaagattcagagccaccc
tctccaggtactccagagatggagcgtgaaggtaagaagagaaaggattttgatggtaaa
gatgaagaattaggtgaacaacaggagtatttgcataagcagaagtgggggttattgagg
aaggatgatttttcgcaggcaccatcaaaagtaacagcatgtgattatcatagggggctt
gatatggtagttgtggggttctcaaatggggtctttggtttataccagatgcctgatttt
gtgtgcattcatttgttgtcgatttctagagagaagattactacagcagtttttaatgag
ctagggaattggctggtgtttggttgtgcaaagcttgggcagttgctagtctgggagtgg
cgttcagagagttatatattgaagcagcaggggcattattttgatgtaaattgtcttgct
tattcacctgattcgcagctattggccactggtgcagatgataacaaagtcaaggtatgg
actgtttcatcgggcttttgttttgtgacatttaccgagcatactaatgctgtcacagct
ctccattttatggctaataaccatagccttttaagtgcatctctagacgggacagttcgt
gcatgggatttgtttcgatatagaaattttaggacttttactaccccttcttctaggcag
tttgtttctttggcatcagatcaaagcggtgaagttatttgtgctggaactctagattct
tttgagatatttgtttggtcaatgaaaacgggtcgtttgttggatattcttagcggtcat
gaaggccccgttcatggcttggtgttttctcctacaaatgctaccttagcttcatcatca
tgggataaaactgttcggttgtggaatgtttttgaaggaaaaggttctggggaatccttc
cctcacacacatgatgttttaacagtggtttatcggccagatgggagacagttggcttgc
agcacattagatggacagattcatttctgggacccacttaatggtgagctaatgtacact
attgagggacgcagggatatttctggagggcgtctcatgactgatcgcagatcagcagcc
aattctagttcaggaaagtgcttcacaacattgtgttattctgctgatggaagctacata
ttagccggtggaagtagcaaatacatttgtatgtatgatgttgctgatcaggttctgctg
cgtcgatttcagataacccacaatctctctctagatggtgttattgacttcttaaactct
aagaatatgacagaagctggcccgatggacttgattgatgatgacaacagtgacactgaa
gaaggtgttgaaaaacaaacacgagggaagttagattatgatttaccaggagccttgcct
aaccatggaaggcctaccattcgaactaaatgcctcaaaattgcccccaccggccggaac
tttgtagctgcaacaacggagggggttctagtctattcaattgatgaatcctttatcttt
gatcccactgatcttgacatagatgttacaccagaggcagttgatgcagcactgaatgaa
gatcagccaaaccgagctttaatccttagccttcgattaaatgaggataatctaatcaaa
aaatgcatttttgccatacgtccagttgatatacctgctgttgcctcatcaatcccttac
agatatatgcaaaggttaattgaggcactttcagatcttctggagagctgcccacatttg
gagttcatgctacgctggtgtcaggagctctgcaaaacacatggtaacaccattcaacaa
aattccagaaacctgcttccatctttaaaatccttgcagaagtcgataaccagaatacat
caggatttggcagatacatgttcctccaatgaatatatgcttcaatatttatgctcggtg
ggtgccaagaagtaa
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