Citrus sinensis (Valencia orange): 102615088
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Entry
102615088 CDS
T02983
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102615088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102615088
03036 Chromosome and associated proteins [BR:
cit03036
]
102615088
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102615088
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
102615088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
102615088
NCBI-ProteinID:
XP_006468950
LinkDB
All DBs
Position
2:7884885..7885925
Genome browser
AA seq
346 aa
AA seq
DB search
MGVSSDPNLDGSDEQQKRSEIYTYESPWHIYAMNWSVRRDKNYRLAIASLLEQYPNRVEI
VQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRV
ELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT
IIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSM
GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgagtagtgacccgaatctcgacgggtcggacgagcagcaaaaaagatcggag
atctatacctatgagtcaccgtggcacatctacgccatgaactggagcgtccgtcgcgac
aagaattaccgactcgctatcgccagcctcctcgaacagtatccgaaccgggtcgaaatt
gttcagctggatgattccactggcgagatccgtgccgaccccaacctctctttcgaacac
ccgtacccacctaccaaaaccattttcatacccgacaaggagtgccaaaaacccgacctt
ttggccacctccagcgatttcctccgcgtgtggagaatctccgatgaggaccggcgcgtg
gagctcaagagtttgttgaatggtaacaagaacagcgaatactgcggcccgctgacctcg
tttgactggaacgaagcggaaccgaggcgaattgggacgtctagtatcgacacgacgtgt
acgatttgggatatcgagagagaagccgtcgatacgcagcttatcgctcacgataaagag
gtttacgacatcgcgtggggcggtgtcggcgttttcgcctccgtctccgctgatgggtcc
gttagagttttcgatttgcgcgacaaggaacactcgacgatcatttacgagagctccgaa
ccggacacgccgttggttcggttgggttggaacaagcaggacccgagatatatggcgacg
ataataatggacagcgcgaaggtggtggttctcgacattcgcttcccgacgctcccggtt
gtggagctgcagaggcaccaggcgagtgtgaacgccattgcgtgggcccctcacagttct
tgccacatatgcacggctggggatgactcacaggcgttgatatgggacttgtcgtcgatg
ggtcagccggtggaaggcgggttggatcctattctggcatacacagctggggcggagatt
gagcagctgcagtggtcgtcttcacagcctgactgggttgccattgcattctccactaag
cttcagattctcagggtatga
DBGET
integrated database retrieval system
