KEGG   Citrus sinensis (Valencia orange): 102615187
Entry
102615187         CDS       T02983                                 
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
  KO
K13338  peroxin-1
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    102615187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102615187
Membrane trafficking [BR:cit04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    102615187
SSDB
Motif
Pfam: AAA PEX-1N AAA_lid_3 AAA_16 AAA_22 NPHP3_N NACHT RuvB_N AAA_5 nSTAND3 RNA_helicase AAA_18 IstB_IS21 AAA_7 AAA_11 AAA_19 ATPase_2 AAA_33 Mg_chelatase AAA_28 AAA_14 TIP49 TsaE AAA_24 AAA_29 NB-ARC Viral_helicase1 NTPase_1 AAA_2 Bac_DnaA ResIII Zeta_toxin AAA_30 AAA_3 ABC_tran AAA_lid_PRS2_C KAP_NTPase PEX-2N FtsK_SpoIIIE KTI12 cobW DUF7320 Cytidylate_kin
Other DBs
NCBI-GeneID: 102615187
NCBI-ProteinID: XP_006468418
LinkDB
Position
2:complement(join(27251246..27251569,27251706..27251823,27252114..27252175,27252302..27252427,27252754..27252954,27253908..27254138,27254344..27254498,27254635..27254728,27254827..27255049,27255261..27255334,27256045..27256136,27256872..27257618,27258501..27258986,27259829..27259928,27260047..27260220,27260705..27260902))
AA seq 1134 aa
MELEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATS
SSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAA
ILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKH
EDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVSLC
SLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSVAK
GHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSRCHFKMLEKDKAFGIGLELD
NKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFKNKKGLECLL
HTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKTKAR
ELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDPVSFYTV
KERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPG
SGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVI
FDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLE
KIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYD
LEILVDRTVHAAVGRYLHSDSRFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGR
SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA
ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV
TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI
LKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPGKMPV
ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRATLA
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggagttggaggtgagagtggtgggtggcgtagagaactgctttgtatcacttcccctt
aaattaatcgagactcttgagtccacgcgctccgcacatcttctccctcaagttctctct
ctcgagcttcgctcccgctccaaccaacgctgggtcgttgcttggtccggcgctacttct
tcttcttcttttatcgaggtcgctcgacaatttgcagaatgcatatccttggcggatcat
acaatagttcaagtgcgagtagtttccaatgtgctgaaggctactttagttaccatagaa
cctctaacggaggatgattgggaagttttagagctaaattcagagcatgctgaggctgct
atattgaatcaggttaggattgtccacgaagcgatgagatttcctttgtggctgcatggc
cgcactatcataacatttcatgtggtttcaacttttcccaagaaaccggtagtgcaactt
gtaccgggaactgaagttgctgttgctccaaagagacgcaagaacaatgtgaagaaacat
gaagattcttacatgcaagcttttaatgaaagtactagtattgcaaaggcacttttacgt
gttcaagattcagatgaaggattgtctcataaatgtaatgttaaaggtgttgagctggga
gtagccctcacttccgttgcatttatcaatccagaaacagctgaaaatgtttcattatgt
tctcttgagttagttgctatattgcctagattatcatccaaagagaataatcccgaaaac
aatgccccaagaataaaaagcaatttaacttcaaaggaaattagtggtggagcttcaact
gacaagaaagaatgccgtcaagcagttgttcaccttttattttcagattcagtggctaaa
ggacatgtaaagattgctcgagctcttcgtctttatttgaatgcagggctgcattcatgg
gtttatttgaagaaatgtactgttaacttgaagaaagaaattcctatggtttcactttct
cgttgtcattttaagatgttggagaaggataaggcttttgggattggcctagaacttgat
aataaaaatcataagacaaagaaaatgcttgagaaaactagctcgggtatctacatggat
gatggagatttgtcagccgaagatgacatcattgctgctctttcttctgagccttcttcg
aaagaagatgaagaggctgtttatcagtttaaaaataaaaaagggttagaatgtctgctt
catacatggttgcttgcacaactcactgccgttgcttcaaatataggatcagaatttaat
acattggttctatcaaatgaaactttgcttcattttgaagtgaaaggatacaagtctggg
acatatggaaaggtaccggcatcatgtaatggcgccttagagaacaaaactaaggccaga
gaattgcggacagaaattttttgtgtactgactttctctgaggaatcattgcatggtggc
aaaaataatgcatatgagctgacccttgaagctagaggccagcagaacaataatacggaa
gctgtacgccagttgtttgggaagctgaactctggtgacccggtatccttctacactgtg
aaagagaggggttctacccaaggttttgattcaaatgtgtcttctttgagctggatgggg
accactgcttcagatgttattaatagaattaaggtcttgttatctcctgattctgggttg
tggttcagcacttaccatcttcctctccctgggcatattctaatacatggacctcctggc
tctggaaagacatcattagcaaaagctgttgcaaaatccctcgaacaccataaagatctc
gtagcacacatagtttttgtatgctgttctagactttctttagagaagggtccgatcatt
cgtcaagcactttctaacttcatatctgaagctttggatcatgcaccttccattgtcata
tttgataatcttgatagcataatttcatcctcttccgacccagagggatctcaaccttca
acttctgtaattgctcttactaaatttcttgtggacattatggatgaatacggggaaaag
aggaagagctcttgtggaattggtcctattgcttttgttgcttctgcacagtctctagag
aaaataccgcagtcattgacctcttcaggaaggtttgactttcatgtgcaactgcctgct
cctgctgcctcagaacggaaagccattttagagcatgaaattcagaggcgttccttagaa
tgttctgatgaaattttgttagatgtggcttccaaatgtgatggatatgacgcatatgat
ctggaaatattggttgatagaaccgttcatgctgctgttggccgttatctgcattctgat
tctaggtttgaaaagcacataaagccgactttggttagggatgacttttctcaggcaatg
catgagtttcttccggttgcaatgcgtgacattacaaaaacttctgcagaaggtggtcgc
tctgggtgggatgatgttggtggtcttactgacattcagaatgctattaaagagatgatc
gaactaccttcgaaatttccaaacatcttcgctcaagctcctctgaggttgcggtcaaat
gttctcttatatggtcctcctggttgtggcaagactcacatagttggtgctgctgctgct
gcttgttcattacgatttatatcagtgaaagggcctgagctgttgaacaaatacattggt
gcttctgagcaagctgttcgggatatattctcaaaagcaactgctgcagcaccatgcctc
ctcttttttgatgaatttgattctattgccccaaagcgagggcatgataatactggagtg
actgatcgtgttgttaatcagtttctgactgagttagatggcgttgaagtgttgactggt
gtatttgtgtttgctgcaacaagtagaccggatctacttgatgctgccctgttaagacct
ggtaggctggatcgccttctcttctgtgattttccatctccacgtgagaggttggatatt
cttaaagttatttctagaaagttaccattggccgatgatgttgatttagaagccatagct
catatgacagaaggatttagtggagctgatctccaagcacttctctcagatgcacagctc
tcagctgttcatgaaattttaaataatattgatagcaatgagcctgggaaaatgccagtc
ataaccgatgctctactgaagtctatagcttccaaggcaagaccatcagtttcagaagct
gagaagctgagactatatagcatttacggacagtttcttgattcaaagaaatctgttgct
gctcagtcaagagatgcgaaaggcaagagagcaactctagcataa

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