Citrus sinensis (Valencia orange): 102615214
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Entry
102615214 CDS
T02983
Name
(RefSeq) eukaryotic translation initiation factor isoform X1
KO
K03260
translation initiation factor 4G
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102615214
03012 Translation factors [BR:
cit03012
]
102615214
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102615214
mRNA cycle factors
Stress granule specific factors
102615214
Translation factors [BR:
cit03012
]
Eukaryotic type
Initiation factors
eIF-4
102615214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
102615214
NCBI-ProteinID:
XP_006474024
LinkDB
All DBs
Position
9:join(33320207..33320413,33321316..33321387,33321536..33321631,33321832..33322041,33322650..33322747,33323127..33323214,33323316..33323666,33323763..33324005,33324123..33325166)
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AA seq
802 aa
AA seq
DB search
MHQGDQTVLSLRPGGGRGGAGGGGGGNSRLFSGSRFDSGAGAAAPSLAFGSFSSDLPFLR
PHGGAPPSATGDSRFEGRERVRYTREQLLQLREAAVIDDDILKIKREFESEVFGEEQIWG
RAENNPPNQPQSRYSEPDNRDWRRPAQSFPSGEFNRDNREFGGRYDFRQPDGSQFNRQDQ
LNYQFSRVQMSSNQGGGPAPALIKAEVPWSAKRGNLSEKERVLKTVKGILNKLTPEKFDL
LKGQLIDSGITSADILKEVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKE
ITFKRVLLNICQEAFEGADKLREEVRQMTAPDQESERRDKERLVKLRTLGNIRLIGELLK
QKMVPEKIVHHIVQELLGHDSSTCPAEENVEAICQFFNTIGKQLDEGPKSRRINDMYFSR
LKELTTNPQLAPRLRFMVRDVLDLRANNWVPRREEVTAKTITEIHSEAEKNLGLRPGATA
SIRNSRGMISGAPGVTGPGGMPITRPGSGGMMPGMPGTRKMPGMPGMDNDNWEFPRQRSM
PRGDGSGMQPGGRVQSPMINKSSSLNTRLLPQGTGGPMGARSALLQGSGTPPPRPSNFIP
GPEPTSQLPIPTKPVTSSPVPAVVEKPLRPAGKLNLDELCRKTISLLEEYFNIRVLEEAL
MCVEELKSPGYHPEVVKEAISLALEKNPPCVDLVTKLLEYLLTQKVITARDIWTGCLLFG
ALMDDVGIDLPRAPHNFGEIIGKLILAGGLDFKVVQEILKKMEEEMYRKSVLDAALRIIS
CSPGQNILDSQASDIEACQSLL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaggtgatcagacggtgttgagcttgagacctggcggtggtcgcggtggtgct
ggcggcggcggaggcggcaatagcagattgtttagcgggtctcgttttgattctggagct
ggcgctgctgctccttctttagcttttggctctttctcttcggatctccctttcttgcgt
ccccatggcggcgcccctccttcagcgactggagactcacggtttgagggtcgcgagcgg
gtgcggtacactcgagagcagctgttgcagctcagagaggctgctgtaatagatgatgat
attctcaaaatcaaacgagaatttgaatctgaagtctttggtgaagaacaaatctgggga
cgtgcggaaaacaatccaccgaaccaacctcagagccgttactctgagccagataatcgt
gactggcgtcgtcctgcacagtcttttccttctggagaatttaatcgagataacagagag
tttggcggacgatatgacttcaggcagccggatggaagtcaatttaaccgccaagaccaa
ctcaattaccaattttcaagggtgcaaatgtcttctaaccaagggggaggtccagctccg
gctttaatcaaggctgaggtgccatggtcggctaaaaggggaaatctttctgagaaagaa
cgtgtcttgaagactgtgaaggggatactgaataagctaacccctgagaaatttgatcta
cttaagggtcaactcatagactctggcatcacatctgctgatatcctaaaggaggttata
tctctcatatttgataaggctgtgctggagcccacattttgccccatgtatgcccagcta
tgttctgatcttaatgagaagcttcctccattcccttctgatgaacccggtgggaaagaa
atcacgttcaagcgtgtcctgttgaatatttgccaggaggcatttgagggtgctgacaaa
ctgagggaagaagtgaggcagatgactgctccagatcaagagtcagagcgtagggataaa
gaaagattggtcaagcttcgtactcttggaaacattcgtttgattggggagctactgaag
cagaagatggtgcctgaaaagattgttcatcacattgttcaggagcttctaggacatgat
agttcaacttgtcctgctgaggaaaatgttgaagccatatgtcagttcttcaacaccatt
ggcaagcagcttgatgaaggcccaaaatcacggcgtataaatgatatgtactttagcagg
ttgaaggaattgactaccaatcctcaacttgctccccggctaaggtttatggttcgagat
gttcttgatctgcgggcaaacaactgggttcctaggcgtgaagaggtcacagcaaaaacc
ataactgaaatccattcagaggccgaaaagaatcttgggttgcgtccaggtgctactgca
agcattagaaatagccgtggcatgatctctggggctccaggggttactggcccgggtggc
atgcctattacacgacctggttcggggggtatgatgcctggcatgccaggaactagaaag
atgcctgggatgcctggaatggataatgataattgggaatttcctaggcagcggtcaatg
cctaggggtgatggatcaggaatgcagcctggaggacgtgtgcagtcaccaatgattaat
aagtcttcatcactgaacactaggctgttacctcagggtactggtggtcctatgggtgct
aggagtgctctgttgcagggcagtgggacccctcctccacgaccatccaactttattcca
ggcccagaacctacgtcccaactccctatacctactaaacctgttacttcttcccccgtg
cctgcagttgtggagaaaccacttcgccctgctggaaagttgaatctggatgaactctgt
agaaagacaatctcattactggaggaatatttcaacatccgagttttggaggaagcactg
atgtgtgtcgaggaactaaagtctccaggttatcaccctgaggttgtgaaagaggcaatc
tcccttgcacttgaaaaaaacccaccctgtgttgatctggttacaaaactcttggaatac
ctgttgacacagaaagtcattactgctagagacatttggacgggatgtttgctctttggt
gctttgatggatgatgttggaattgatttaccaagagcaccgcataattttggtgagatt
attgggaaactaattctggccgggggattggattttaaagtggtgcaggagatcctcaag
aagatggaagaggagatgtatcggaaatctgtacttgatgcagcattgaggataataagc
tgtagtcctgggcaaaacatattggattcacaggcatctgatattgaggcctgccagagt
ctgctgtag
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