Citrus sinensis (Valencia orange): 102615241
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Entry
102615241 CDS
T02983
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102615241
04121 Ubiquitin system [BR:
cit04121
]
102615241
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102615241
Membrane trafficking [BR:
cit04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102615241
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102615241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-Nse
CxC4
zf-RING-like
Zn_ribbon_6
Rad50_zn_hook
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
102615241
NCBI-ProteinID:
XP_024955402
LinkDB
All DBs
Position
6:complement(22268034..22268963)
Genome browser
AA seq
309 aa
AA seq
DB search
MSSGRNTHWCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEERDQR
LGLMEAFSAFMRHRMADRHSHDIRGRYDSTPEHGQGFGPLLIFGGQIPLRLSGNSGFEAI
FGGAPGLGFARGNTGDYFIGPGLEELFEQLSANNRRGPPPAARSAIDAMPTVRITQRHLR
SDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIH
QSSSGQSRSTTFGSNGNGRENQGRRNLFSGFWPFRSSNSSSNHNGTTESSSPAMHENNPH
MGYSGWPFD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggcagaaacacccattggtgttacagatgcaggaggccagttcgcctgcaa
ggagaagatgcagtctgcctttactgcagtggaggatttgttcaagagcttgatgatatg
gtgagtgtaagtcctctggatttctttggcctggacaatgatgaagaacgtgaccagagg
cttggacttatggaagctttttcagccttcatgaggcaccgaatggcagacaggcatagc
catgatattcggggaagatatgattcaactcctgagcatggtcagggttttggacctttg
ttgatatttggtggccaaattcctttaaggttgtctggaaatagcggattcgaagcaatc
tttggtggtgctccggggcttggctttgcacgtggtaatactggtgattattttataggt
cctggattggaagaactgtttgagcagctttcagctaataatcgacgtggccctccccca
gcggcgagatctgcaattgatgctatgcccaccgttaggatcacacagaggcatctccgt
tctgattcgcactgtccagtttgccaagataaattcgagctggggtctgaagctagacaa
atgccatgtaaccatatataccactcagattgtattgtgccatggctagtgcagcacaac
tcatgtcctgtatgtcgccaagaattaccactgcaagggtcaagtagcagtcgtattcat
caaagctcaagtggtcaaagtcgaagcaccacttttggtagtaatggcaacggaagggag
aatcaaggaagacggaatttgttctctggtttctggccgttccgatcttcgaattcaagc
tctaatcacaatggaacaactgaaagcagttcaccagcaatgcacgagaataaccctcac
atggggtattccggatggccatttgattaa
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integrated database retrieval system
