Citrus sinensis (Valencia orange): 102615270
Help
Entry
102615270 CDS
T02983
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cit01002
]
102615270
Enzymes [BR:
cit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
102615270
Peptidases and inhibitors [BR:
cit01002
]
Serine peptidases
Family S54: Rhomboid family
102615270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
102615270
NCBI-ProteinID:
XP_006488666
LinkDB
All DBs
Position
8:complement(join(29062360..29062482,29062732..29062858,29063358..29063617,29063701..29063864,29064105..29064268,29064463..29064911))
Genome browser
AA seq
428 aa
AA seq
DB search
MATNNNKTPNDFEITVMSSPRPRPPPPLEAASSPAETESTSSTTTATRRTSVSSPGGASS
SSSSRPASTAPPRGIPETAMYSDFLSPFKRHFPWMVPGFVVANIVLFVITMYENNCPQTS
ATGCLGAKFLGRFSFLPLKDNPLLGPSSPALDKMGALTVAKVVTQHQVWRLLTCIWLHGG
VFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGISVGASGALFG
LLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHIGGFLSGFLLGFV
LLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAGYTVGLILLLRGGNL
NNHCSWCRYLSCVPTPWWNCKAQQLSCQSSQMGSQLNMTCTSNGKSKAYTMPGDKQFDLQ
QLCAQLCS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacaataacaagacgccaaatgactttgaaatcacggtgatgagttcgcct
cggcctcggcctccaccaccgcttgaggcagcgagttcgccggcggagacggaatctaca
tcatcaacgacaacggcaacgaggagaacttcggtatcgtcaccgggaggagcatcgtct
tcgtcgtcatcacggccagcgtccacggcgccgccacgtggaatccccgaaacggcgatg
tacagtgattttttgagcccgtttaaacggcatttcccgtggatggtcccgggtttcgtc
gtagccaacattgttttgtttgttatcacaatgtacgaaaataattgccctcaaacttct
gctactggttgtttgggtgccaaatttttgggtagattttcatttttgcccctgaaagac
aatcccctcctcggcccttcctctcccgcgttagacaagatgggtgctttaacagtagcc
aaggtggtaactcaacaccaagtgtggcgtttgttgacttgtatatggttgcatggtggg
gttttccatgtacttgccaatatgttgagtctactattcattggaattcggcttgaacaa
gaatttggatttgttcgaattggattcctctacgtcctctctggttttggtgggagtttg
acgtcggctctttttattcaagagggtatatctgtcggtgcctctggagctctttttggt
ttacttggagcaatgctctcggagcttttcacaaattggactatctatgcaaataagttg
gcagcattgcttactctcattgtcatcatcagtataaatttggcagtgggaatcctccca
aaagtggacaactttgctcatattggaggatttctttctggttttcttcttggatttgtg
cttctaatccggcctcagtttggatggattagtcagaaaaaagctcctcctggatacatg
ataaattgcgtgaagtctaaacataagccatatcagtatgtattttgggtcatctctttg
attctgctgattgccggatatacagttggcctgattttgctgctaagaggaggtaacttg
aacaatcactgttcctggtgccgttatttgagttgtgtccctactccttggtggaactgc
aaagctcaacaattatcttgtcagtcgagccaaatgggaagtcaactcaatatgacatgt
acaagcaatggaaaaagcaaagcgtacacaatgccaggcgataaacaattcgacctccag
cagttatgtgcccagctctgcagttag
DBGET
integrated database retrieval system
