Citrus sinensis (Valencia orange): 102615366
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Entry
102615366 CDS
T02983
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102615366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102615366
Spliceosome [BR:
cit03041
]
Complex A
Other components
Complex A specific factors
102615366
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
PHD_4
RRM_5
KH_PNO1_2nd
RRM_7
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
102615366
NCBI-ProteinID:
XP_006490149
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All DBs
Position
9:complement(4518144..4520537)
Genome browser
AA seq
797 aa
AA seq
DB search
MESTVESNPQYQTLDFNQNPPLPQDTLDHDSQNPPKTLAPPDAQNPQPASENGHDKNNEN
SCNNNNDVAAADYIKQKPLLSENGLTNTHSGTDKDQSGGEEETSSRRRRRSRWDPPPSES
GGTEGNGDSGSGTRKRRSRWADDEPKPVIQLPDFMKDFTGGIEFDPEIQALNSRLLEISR
ILQSGLPLDDRPEGQRSPSPEPIYDNMGIRINTREYRARERLNKERQEIISQIIKRNPAF
KPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKE
GRLQQKRDLKPDPSENEDLHVLVEAETQESLEGAAAMVEKLLQPVDEVLNEHKRQQLREL
AALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKGTTGK
KMDDEYQNFLAELGGTLPESASKQSTTLALGPGSGSSGSNPPWANNSGSSGTPGHPGLGS
NGAKPIKELDDTNLYIGYLPPTLDDDGLIRLFSTFGDIVMAKVIKDRVTGMSKGYGFVKY
ADIQMANNAIASMNGYRLEGRTIAVRVAGKPPQPTVPPGPPTSTMPTYPVSAPPVGGYPS
QQYAPGGPLPNPPAASYTGAPVPWGPPVPPPYAPYAPPPPGSTMYPPIPGQPMPPYGVQY
PPPVQTAPPGALTAPPGAPTQTATSSEAQQHSFPPGVQSESSSSAPAASANMYGSSMAPM
PPNVQPAYATAPLGYSPYYNAVPPPPPPAPVSAVDHSQNLGNVPWATNPPVQPPVSSAEK
SNYGADAEYEKFMAEMK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaacagttgaatcaaacccccaatatcaaaccctagatttcaatcaaaacccg
ccgttaccgcaagacaccctagatcacgattcacaaaacccgcccaaaaccctagctcct
cccgatgctcaaaatccccagccggcttccgaaaacggccacgacaaaaacaatgagaac
agctgtaacaataacaatgacgtcgccgcagccgattacattaagcagaagccgttgctt
tcggaaaatggtctgaccaacactcattccggcaccgataaggatcagtcgggtggcgag
gaggagacctcgagcagacgacgacgtcgcagcaggtgggatccgccgccatcggaatca
ggcggtacggaaggtaatggcgactctggaagcgggaccaggaagcggagatcgaggtgg
gcggacgatgagccgaagccggtgattcagttgccggattttatgaaggactttactgga
ggtattgagtttgacccggaaattcaagctttgaatagtcgtttgttagaaatttctaga
attcttcagtctggtttgcctttagatgatagacctgagggacaaaggagtccttcgccc
gaaccaatttatgataatatgggaattaggattaatactagagagtatcgtgcaagagag
agattgaataaggagagacaggagattatatctcagattattaaaagaaatccggcattt
aagccaccggcagattataggcccccaaagcttcagaagaagctttatattccgatgaaa
gaataccctggttataattttattggtttgattattgggccgagagggaatacacaaaag
agaatggagagagagacgggtgctaagattgttatacgtggtaaagggtcagtgaaagag
ggaaggttgcaacagaagagggatttgaagccagacccatcagagaatgaagatttacat
gtgttggtggaggcagagactcaggaatctcttgaaggtgcagctgcaatggtggagaag
ttgttgcagccagtagatgaggtgttaaatgagcataagaggcagcagttgagggagctt
gcagctttaaatgggactataagggatgaggagtactgtcggttatgcggtgagcctgga
catcggcagtatgcatgtccatcacgtacttccactttcaagagtgatgtgctttgtaag
atctgtggtgatggtggccatccaactatcgattgtccagttaagggaacaacggggaag
aaaatggatgatgaatatcagaatttcttggcagagttaggagggactcttcctgaatct
gcaagcaaacaaagtactacattggctctgggccctggcagtggcagttctggaagtaat
cctccttgggctaataattcaggcagttctgggactccagggcatcctggactagggtca
aatggagctaagcccatcaaggaattggatgatacaaacttgtatattggatatttgcca
ccgacgcttgatgatgatggtttgattaggttgttttctacttttggtgatattgtgatg
gctaaggttattaaggaccgggttacaggaatgagcaaaggttatggttttgtgaagtat
gctgatattcagatggccaataatgctattgcaagcatgaatggttaccgtcttgagggg
cgaaccattgctgtgagagttgctggtaagcctcctcagcctactgtgcctccgggccct
ccaacttcaacaatgcccacctaccctgtttctgctccaccagttggtggctatccatct
cagcagtatgcaccaggcggtcctcttccaaatccaccagcagcgagctatacgggggct
cctgttccttggggaccaccagttcctccgccttatgctccttatgctcctcctcctcct
gggtcaaccatgtatccacccatccctggtcaaccaatgcctccttatggagtacaatat
cctccaccagtgcagacagctccccctggtgctctaacggctccccctggtgctccaacg
cagactgcaacttcaagtgaagcacaacaacatagtttcccaccaggagtgcaatccgaa
agtagcagttctgctccagctgcgtcagcgaatatgtatgggagctccatggctccaatg
ccacctaatgttcaacccgcatatgcaactgcgccattaggttattcaccttactacaat
gcagttcctcctccccctccacctgctcctgtctcagcagtggaccattcacagaacttg
ggtaatgtgccttgggccacaaatccaccagtgcagcctccagtttcttctgcagagaag
tcaaactatggtgcagatgctgaatatgagaagtttatggcagagatgaaatga
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