Citrus sinensis (Valencia orange): 102615519
Help
Entry
102615519 CDS
T02983
Name
(RefSeq) truncated transcription factor CAULIFLOWER A isoform X2
KO
K09264
MADS-box transcription factor, plant
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102615519
Transcription factors [BR:
cit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
102615519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
FliD_C
DUF4407
Spectrin_Anc-1_2
Caps_syn_GfcC_N
Med4
HlyD_2
DUF6730
Motif
Other DBs
NCBI-GeneID:
102615519
NCBI-ProteinID:
XP_006482432
LinkDB
All DBs
Position
6:join(24461000..24461184,24464552..24464630,24464956..24465020,24465123..24465222,24465332..24465373,24465477..24465518,24465625..24465719,24465866..24465989)
Genome browser
AA seq
243 aa
AA seq
DB search
MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSTE
SSMERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPL
SLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLT
EQQNQMAQNSSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMHDHV
NHS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaggtagggttcagttgaagcggatcgagaacaagattagcaggcaagtaact
ttctccaagagaagagctggtttgttgaagaaagctcatgagatctctgtgttatgtgat
gctgaggttgctttgattgtcttctcaacaaaagggaaactttatgagtactctactgaa
tcaagcatggagaggatcctagaacggtatgagagaaatgcatatgtggaacaacagctt
gttacaaatgacgctgaactccagggatgctggtctctggaataccccaatctcaagagt
aggattgaagtattggaaaaaaatataaggaacttcatgggaggagacctggaaccacta
agccttcgagagcttcagtatttggagcagcaaattgatacttctcttaagcgccttcga
aatagaaagaaccaactgacacatgaatcaatttctgatctacaaaaaagggagagggca
ttgcaggatcaaaacaacatgcttgcaaagaagctcaaggaaaaagagaggacactgact
gagcagcagaaccagatggcacaaaactcatcacccctcatgccaacatttccttctctg
actattgggggcaatatccaggtgatgatgagaggaagcgtaattgatgagcccgatgag
aatcaaactaggcagaatatgaggagcacagttgtaccttggtggatgcatgaccatgta
aatcactcatga
DBGET
integrated database retrieval system
