Citrus sinensis (Valencia orange): 102615670
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Entry
102615670 CDS
T02983
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
cit03015
mRNA surveillance pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102615670
09122 Translation
03013 Nucleocytoplasmic transport
102615670
03015 mRNA surveillance pathway
102615670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102615670
03041 Spliceosome [BR:
cit03041
]
102615670
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102615670
Spliceosome [BR:
cit03041
]
Complex C
Other components
EJC/TREX
102615670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
102615670
NCBI-ProteinID:
XP_006470660
UniProt:
A0A067FDE7
LinkDB
All DBs
Position
2:complement(join(3331678..3331723,3332057..3332208,3333932..3334068,3334632..3334887))
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AA seq
196 aa
AA seq
DB search
MANAEVDALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEAD
SERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH
LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKN
MRPGRTHRSRSPRRRY
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcagaagtggacgcgctcgacttcgaggacgacgacttgatggacgaggac
gggactgccgacgtcgatgcatcctcttccccgcgggccccgcagcccaagcttaagtcc
gccatcactggtggcgcacctaagaagaccaaaggacgcggttttcgtgaagaagccgac
tccgagcgacatagccggctcgctgatcgtaattttgagtctcttggcaccgatggggga
ccgggtccccaacgatctattgagggatggataattttggttactggtgtgcatgaagag
gcacaagaagatgatttacaaaatgtatttggtgaatatggggagatcagaaacttgcat
ttgaatcttgatcgtcgtacaggttttgtgaaggggtatgcgctgattgaatatgagaat
tttgaggaagcacagaatgccataactgcaatgaatggaggtgaacttcttacacagacc
ctgactgttgattgggccttcagcaatgggcctagtactggacccttcaaaagaaagaac
atgaggcctggacggacacatcgctcaaggagtcccaggagaagatactga
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