Citrus sinensis (Valencia orange): 102615718
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Entry
102615718 CDS
T02983
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102615718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102615718
04131 Membrane trafficking [BR:
cit04131
]
102615718
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102615718
Membrane trafficking [BR:
cit04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
102615718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
102615718
NCBI-ProteinID:
XP_006476403
LinkDB
All DBs
Position
3:complement(join(1059210..1059341,1059512..1059638,1059902..1060014,1060301..1060456,1060725..1060802,1060891..1060991,1061116..1061227,1061371..1061529))
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AA seq
325 aa
AA seq
DB search
MDKAVATLDKGTTSSSWNYCGQRLATGSTDGTLSIFDSPDPSSSSFTCNLKTKVHAGAIL
KVVWVPPEFGDAVACICSDGSLLLWEEIVEDAQPLQWKLCKSFESTSTQVLDVQFGVSST
SLKLVAAYSDGHVKVYELLDPLILKNWQLQAEFQNAIDSVTMFRKASCISASISWNPQKG
ENQGSSFVLGFNSDTPQLNSSKVWEFDEAHNRWLPVAELALPEDRSDEVYAVAWALNIGR
PYEVIAVATQKGIAIWHVGANPELDGRLSVEKVALLSGHGGEVWQMEWDMSGTTLATTGS
DGMVRLWQSNLNGVWDEQAAFQPTA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagcagttgcgactcttgacaaaggcacaacgagctcctcgtggaactactgt
ggccagagattagccactggttcaaccgacggcactctctccatctttgactcacctgac
ccctcttcttcctcattcacctgcaacctcaaaactaaggtacatgcgggtgccatttta
aaggttgtttgggtgccaccggagttcggtgacgcggttgcctgtatttgctcggatgga
agtttgttgttgtgggaagagattgttgaagatgcacagcctctgcagtggaagctctgt
aagagctttgaaagcacttcgactcaagtgttagatgttcaatttggagtctcttccaca
agtttgaaattggttgctgcatactcagatggccatgttaaagtttatgagctcctagat
cccttgatactgaaaaattggcaacttcaggctgaatttcagaatgctattgattctgtg
actatgtttaggaaggcttcatgcatatcggcatccatttcttggaatccacagaagggt
gaaaaccagggatctagttttgttctcgggttcaattcagacacaccacaactcaattcc
tccaaggtatgggagtttgatgaggctcataatagatggctaccagtggcagagttggct
ttgcctgaggacaggagtgatgaggtttatgctgtagcatgggcactaaacatcggccgg
ccatatgaggtgatagctgttgcaactcagaagggcattgccatttggcatgttggagca
aaccccgagttggatggaaggctctcagtagagaaggttgcattgctctctggccatgga
ggcgaggtgtggcagatggaatgggacatgagtgggacgaccttggcaacaacaggaagt
gatgggatggtaaggttatggcaatctaacttgaatggcgtttgggatgaacaggctgca
ttccaacccactgcttag
DBGET
integrated database retrieval system
