Citrus sinensis (Valencia orange): 102615822
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Entry
102615822 CDS
T02983
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102615822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102615822
03036 Chromosome and associated proteins [BR:
cit03036
]
102615822
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
102615822
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
102615822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
eIF2A
Ge1_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
RMC1_N
Beta-prop_DCAF12
Beta-prop_SPT8
CFAP43_N
YajC
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
102615822
NCBI-ProteinID:
XP_006481651
LinkDB
All DBs
Position
6:complement(join(20033796..20033936,20034051..20034632,20034756..20035025,20035522..20035800,20035936..20036016))
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AA seq
450 aa
AA seq
DB search
MDAGPNKVQSRSPLQERVRQRKCSGENLDRFIPNRSAMDFDYAHYMLTEGKKGKENPVAA
CSPSREAYQKKLAEAFNMNRTRILAFKNKPPTLIDPIPKEFFSSSVHQSKPAKPRRHIPQ
SSERTLDAPELVDDFYLNLLDWGNSNVLAIALSNTVYLWDASNGSTSELVTIDDEDGPVT
SVSWAPDGRHMAIGLNNSHVQIWDSTANQQLRTLRGCHRSRVDSLAWNNHILTTGGMDGK
IINNDVRVREHIVETYRGHQQEVCGLKWSASGQQLASGGNDNLLFIWDRSMASSNSPTQW
LHRLEDHTAAVKALAWCPFQGNLLASGGGGGDQCIKFWNTHTGACLNSVNTGSQVCSLLW
SKHERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGNTVASAAGDETL
RFWNVFGSPEVAKPAPKANPEPFAHLSRIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggacccaacaaggttcaatcaagaagccctcttcaagaacgggttcgtcag
agaaaatgctccggagaaaatttggacagatttattccaaataggtcagcaatggacttt
gattatgctcactatatgctgacagaagggaagaagggcaaagagaatccagttgcggcg
tgctcgccatcaagagaggcttaccagaagaaattggcagaagccttcaacatgaaccgg
acccgaatcttggctttcaagaataagccacctactttgattgatccgatcccgaaggag
ttcttttcatcttctgttcaccagtctaaacctgccaaacccaggagacacattcctcag
tcttctgagaggacattggatgcccctgagcttgtggatgatttctacttgaatttgcta
gattggggtaatagcaatgtgcttgccattgctctcagtaacacagtgtatctctgggat
gcttcaaatggttctacctccgaacttgtcaccatagatgatgaagatggtccggttaca
agtgtgagttgggctcctgatgggcggcatatggctattggcttgaataactcccatgtc
cagatatgggattctactgccaatcaacagctaagaacattgagaggttgtcatcgatca
cgagtagattcactggcttggaacaatcacatacttactactggaggaatggatgggaag
attatcaacaatgatgtgagagtgagagaacacatcgttgaaacctacaggggacaccag
caagaggtttgtggacttaaatggtcagcctcagggcagcagctagcaagtgggggaaat
gataatctccttttcatatgggatagatccatggcctcttcaaattcaccaacacaatgg
cttcacagactagaagaccatacagctgcagtgaaagcccttgcttggtgtccatttcag
ggaaatttgttggcctctggtggaggtgggggtgaccaatgcattaagttttggaacacc
cacactggcgcttgcttgaattcagtgaatactggctctcaggtatgctctcttctatgg
agcaaacatgagcgcgaattgcttagctctcatggatttacacagaatcagctcaccctt
tggaaatatccatcaatggtgaagatggcagagctcacaggtcatacctctagagttctg
ttcatggctcagagcccagatggaaacacagtcgcatctgcagctggagacgagacttta
cgattctggaatgtgtttgggtctcccgaagtggcaaaacctgcacctaaagcaaaccct
gaaccatttgctcatttaagccgcatccgttga
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