Citrus sinensis (Valencia orange): 102615874
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Entry
102615874 CDS
T02983
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102615874
Transcription factors [BR:
cit03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
102615874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_TATA_bd
DUF3450
LegC3_N
At4g38062_C
CENP-F_leu_zip
PEP-utilisers_N
DivIC
T1-F
APG6_N
CC_Bre1
HH_AprE
DUF7491
DUF8429
LUZP2
SPC25_N
ZK652
ADIP
DUF8439
Motif
Other DBs
NCBI-GeneID:
102615874
NCBI-ProteinID:
XP_006492535
LinkDB
All DBs
Position
9:join(16069551..16069784,16077679..16078926)
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AA seq
493 aa
AA seq
DB search
METSAASGGPGGVGGGPAPFLIKTYDMVDDSSTDEIVSWSDNKNSFVVWNPPEFARLLLP
TFFKHNNFSSFIRQLNTYGFRKIDPEKWEFSNDDFVKDKRHLLKNIHRRKPIHSHSHPQT
QGSSVDPERATFEEQMERLSHEKSALEANIVRLKQQRSTAKIQLEDLAQRIDSMEQRQEN
LLTFLQKAVQNPTFVDHLARKIESMDISAYNKKRRKPQVDQSKPIVESSLLDNNSCSTSR
PESGNIFHQDFSNKLRLELSPAVSDINLVSHSTQSSTEDRGSPQKKISEVEPKVAHTRTE
GNLYVPETFELSDTGTSFTFKMDSTFSRKVPANDSSRVYSLQRRSTSNEEVDGHVSCHLN
LTLASSPLQINRGLHSSRMPQPSKDIAKTTELRYNSNDEESDTRPFPSNRNLGHEDASIV
SPQEAPNNNPAPAAAPVRVNDVFWEQFLTERPGSSDNEEASSSYRANPYEEQEDKRSGLG
MSRNAKNMEQLTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcggcggcgtcaggtggccccggcggagtaggaggagggccggcgccgttt
cttataaagacttacgacatggttgacgattcatcaacggacgagatcgtgtcttggagc
gacaacaaaaacagttttgttgtttggaacccacctgaattcgctcgtcttctgcttcca
acttttttcaagcataacaatttctctagcttcattcgacagctcaatacctatggattc
cgaaaaattgatcctgagaagtgggaattttcaaatgatgattttgtcaaggataaaagg
catcttcttaagaatatccaccgcaggaaacctattcacagccacagtcaccctcagact
cagggttcatcagtggatcctgagagagcaacatttgaggaacaaatggagaggctttca
catgagaaatctgcactggaggcaaatattgtaagattaaaacagcagcggtcaactgca
aagattcagttagaagaccttgcacagcgaattgatagtatggagcagaggcaggagaat
ttgttgaccttcttgcaaaaggctgttcagaatcctacttttgttgatcatcttgcccga
aaaattgagtctatggatatctcagcatacaataagaaacgacgaaaaccacaagttgat
caatcaaagccaatcgtggaaagtagtcttttggacaacaatagctgttctacttccaga
cctgagtctgggaatattttccaccaagatttctcaaataagctcaggttagaattatca
ccagctgtttctgatattaatttggtttcacatagcacacagagttccactgaagatagg
ggaagtccgcagaagaaaatttctgaggtggaaccaaaagttgcacacacaagaacagaa
ggcaatttatatgtgcccgaaacatttgaactttcagatactgggacatcttttacattt
aaaatggactcaactttctcgagaaaagtaccagcaaatgatagctcgagagtttattcg
ttgcagcggagatcgacttctaatgaagaggttgatggccatgtttcttgccacttgaat
ttaactctggcatcttctcctctgcaaatcaacagagggcttcattcatctaggatgccc
cagccaagtaaggatattgccaaaactacagaattgaggtacaattctaatgacgaggaa
tctgatactagaccatttcctagcaacaggaatctgggtcatgaggatgcctctatagtt
tctcctcaggaggccccaaacaacaatccagcacctgcagctgccccagttcgagtaaat
gatgtattttgggaacaattccttacggagcgaccaggttcttcagataatgaagaggca
agttcaagttatagggcaaacccatatgaagagcaggaagataaaaggtcgggccttgga
atgtccagaaatgctaagaatatggagcaactcacactttga
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