Citrus sinensis (Valencia orange): 102615935
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Entry
102615935 CDS
T02983
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 2-like
KO
K13103
tuftelin-interacting protein 11
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102615935
Spliceosome [BR:
cit03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102615935
Other components
Complex C specific factors
102615935
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
102615935
NCBI-ProteinID:
XP_006485913
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Position
4:complement(join(3756667..3758321,3758629..3758743))
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AA seq
589 aa
AA seq
DB search
MEEESVEYERNQPMHDVLDFSDRRSRRDPITPGLVSTGDILDPIRSIDAINSDKELMLNE
SLLKYLEERRRGKQRGFSIRNTNEYWKNRRSESPKMSKKKQEQFYSIVREEAADRKAKRA
MARMEIMKGGQHLQKNEDDYFGLDEILREQALSQENKTVGQQQQPSEFHKSIDIETAHEV
PNMMEKYLCEELKRQKEALRLQEELKRQKEALRLQEELETSFNLQKEVEKLETMAADTKL
QFLDIEKIVSVLSQIEQESSSGTLTLDSLAYYFIDLKRRFSLDFEVLKLSRVAYSLALPF
FMRMFQGWQPLRNPSHKLDVVSVWMDVLEFDYCCDDSEKSMPYTWLVSKIVLPALSMSSA
NTWDTSDSEQMLRFLECWENLLPPSVFYTILNEIVMPKLSSAIESWDALRETVPIHDLVL
PWIPFLGFRVGGGLYEMILTKLRSVLDACHPGDVSAYSILSPWKIMIDTETWEQLMSQYV
DPKLRVNLQELGQFESQQKAAGQAQEKAAAADLDSGTLIDGMDAGSDGGMTRRPLQVILV
ELEKSPENQNLVNGDEMLSLATDAAQVLQPGFRKRCYRMVLRTIPLEDA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaaagcgttgagtacgagaggaatcaaccgatgcacgacgtgcttgatttc
agtgatcgcagaagtcgccgagatccaattactccggggctcgtttcaacaggagacatt
ctagatccaataagaagtatagatgccattaactctgataaagaactgatgctgaatgag
agtctgttgaaatatctcgaagaaaggcgaaggggaaagcagagaggattcagtatcaga
aatacgaatgagtattggaagaataggagatcggagagtccgaagatgtcaaagaagaag
caggaacagttttatagtatagtgagagaagaagcggctgacagaaaggctaagcgtgct
atggccaggatggagattatgaagggtgggcaacacttgcagaaaaatgaggatgattat
tttggattggatgaaatattgagagaacaagccctgtcacaggagaataagactgtgggg
cagcagcagcaaccatctgaatttcacaagtccattgacattgagactgcacatgaagtc
ccgaatatgatggaaaaatatttgtgtgaggagctgaagaggcagaaggaagcacttcgc
ttgcaggaggagctgaagaggcagaaggaagcacttcgcttgcaggaggagctggagaca
tcattcaatttgcagaaagaggtggagaagttggaaacgatggcggccgatacaaagctg
cagttccttgatattgagaaaattgttagtgtcttgagccaaatcgagcaagagagttct
tctggaacattgactttggactcacttgcatactatttcattgacttaaagaggaggttt
tctctcgattttgaggtccttaagttgtcccgtgttgcttattcacttgctttgcccttt
tttatgaggatgttccaaggttggcagcctcttcgaaatccatcccataaactcgatgtg
gtgtcagtttggatggatgtgctggaatttgactactgttgtgatgactcagagaaatcg
atgccttatacttggctggtttcaaagattgtcttacctgctttgagcatgtctagcgcc
aatacctgggacacgagtgactctgagcagatgcttagattcttggagtgttgggaaaat
ttgctgcctccttcagttttttatactattttgaatgaaatagttatgccaaaactgtca
agtgctatagagtcttgggacgcacttcgggaaactgttccaatccatgatctggtgctt
ccgtggattccattcttgggattcagagtgggcgggggtttgtatgagatgattcttaca
aagctgagaagtgttcttgatgcttgtcacccaggtgacgtttctgcatatagtatactg
tctccttggaagattatgattgatacggaaacgtgggaacagcttatgagtcaatatgta
gatccgaaactgcgggttaacctacaagagctggggcagtttgagtctcagcagaaagca
gcaggacaagcccaagagaaagcagccgcggccgaccttgatagtggaaccctgatagat
ggtatggatgcagggagtgacggtgggatgactcggagaccactgcaggttatcctagta
gagcttgaaaagagtcctgaaaaccagaaccttgttaacggtgatgagatgttgtccctc
gccactgatgcggcgcaggtgcttcaacctggtttcagaaaacgctgttatcgtatggtg
ctgcggacaataccacttgaagatgcttaa
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