Citrus sinensis (Valencia orange): 102615951
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Entry
102615951 CDS
T02983
Name
(RefSeq) zinc finger CCCH domain-containing protein 42 isoform X1
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102615951
Spliceosome [BR:
cit03041
]
Complex B
Other components
RES complex
102615951
Complex C
102615951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCCH
zf-CCCH_4
zf_CCCH_4
RRM_7
Torus
zf-CCCH_2
DUF1866
RRM_5
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
102615951
NCBI-ProteinID:
XP_006488501
LinkDB
All DBs
Position
8:complement(join(29834499..29834921,29835619..29835806,29835915..29836024,29836272..29836444))
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AA seq
297 aa
AA seq
DB search
MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG
EIVDVNLVRDKGTGKPRGFAFVAYEDQRSTILAVDNLNGAQILGRTIRVDHVAKYKKKEE
EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG
FSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHS
DNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttaacacaggtgaaaaggattcagcacataaattcaaaggaagcggatcta
ggaatatccgacgacgcttcgtggcatgccaagtacaaagattcggcttacgtttacgtc
ggcggcatccctttcgatctcactgaaggcgatcttctcgcggtttttgcccaatgtgga
gagattgttgatgttaatcttgtaagagacaagggtactggaaaacccagaggtttcgct
tttgttgcatatgaggaccaaagaagtacgattctcgctgtagataatctgaatggtgct
cagatattaggacgaactataagagttgatcatgttgctaaatacaaaaagaaagaagaa
gaggatgaagagacacggcagcggatgcgggaggaacgaggagtctgccgtgctttccag
agaggtgaatgtactcgcggagacggatgcaaattttcccataatgagcagagagctgca
aataccggtgggggtcctcaggatagaagttcgagatggggacatgagaagtttgaaggt
tttagctggggtaagaatgattcaagttccagagcaacaggcagtggaagggtggcccta
gagggcaatccaaatcaaagtgatagaagggaggaaaagagatcaataaggcacgatcat
agagagaaaccaagagaagatcatggtaggagggaagataagagatcgcgaaggcatagt
gacaacaatgaatttgaggcaaggtccagagaggatcattacaggagggatgaaaagaga
cctaaaaggcatgaatctgaatcctatttaagagaggaccaagacagaagaggaggggac
aaatcctcaactgggcgtggggactcatcgtcccaccgtcatagagagagatga
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