Citrus sinensis (Valencia orange): 102616105
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Entry
102616105 CDS
T02983
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102616105
Membrane trafficking [BR:
cit04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102616105
Protein recycling
Other Rab GTPase associated proteins
102616105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF7311
Motif
Other DBs
NCBI-GeneID:
102616105
NCBI-ProteinID:
XP_006478314
LinkDB
All DBs
Position
3:join(30813840..30813958,30814041..30814188,30814584..30814754,30814916..30815095,30816248..30816515,30816826..30816945,30817668..30817909)
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AA seq
415 aa
AA seq
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MDTSSSSSASAAAPSAVTFYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQ
EFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSEDVKIDQEISEK
ICLLQTFLRPEHLDIPTFLQNEASWLLAEKELQKINALKAPREKVLCIMNCCRIINNLLL
NASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLV
SAKTFILDLNAKSLSMEETEFEKSMQAARLANKVTLIEESTTSNGIKTLGEQGHPERHDV
TRIEASAMSNDRKSLEEQRRVGPSQRIYGNNTITSGGYGYPFMEAEASQLTTGDVEKLLS
VYKDVVRKYTNLCRAVRHVSVPMTVAPIPHFEGNNSSFKQPATKTSTSTDSKREE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcgtcgtcgtcgtcggcgtccgccgccgctccctcagcagtgaccttctac
gattttctcgatcgcatgcgcaaccccgcttccctcgatctcgttcgctccatcaaaagc
ttcatagtatcattttcatttaacaatgcgaaccccgaaaatgatggcaaaagagttcaa
gaattcttcacgacaatggaatctgctattaaagatcatcccttgtgggctaatgccacc
attgaagctattgagtcggctatggagggtctggagaaatatgtcatgacaaaactgttt
tctcggacatttgcatcaacttctgaagatgtgaagattgatcaagaaatttcagagaag
atatgtttgctgcaaaccttcttgaggcctgaacacttggatataccaacgtttcttcaa
aatgaagcttcgtggctgcttgccgagaaagaactgcagaagatcaatgctcttaaagct
cctcgtgagaaggttctttgtattatgaattgttgcaggatcatcaacaatttgcttctc
aatgcatctatttcggaaaatgttgagctgggaggagctgatgactttcttcccgtcctc
atttacattatcatcaaggccaatcctcctcagttgcattcaaacatcaaattcattcag
ttgtaccggaggcaggcaatgcttgtttcagaagcagcttattatttcacaaatcttgtc
tcagccaagacatttattcttgacttaaatgctaaatcactttctatggaggaaactgag
tttgagaaaagtatgcaagctgcaagattagccaacaaagttactcttattgaagaatca
accacctcaaatggcataaaaaccttaggagagcagggacatcctgagaggcatgacgtc
acacgaatagaagcctcagccatgtcaaatgacagaaaatccttggaagagcagagacgt
gtaggtccatctcaaagaatatacggcaacaatacaattacaagtggtgggtatggatac
ccttttatggaagctgaggccagtcaattaacaactggtgatgtggagaaattgttgagt
gtgtacaaggatgtggtaagaaaatatacaaatctctgcagggctgttagacatgtctcg
gtgcccatgacagtcgctcctattccgcattttgaaggaaacaatagctcattcaaacag
cctgctactaaaacaagtacaagtactgatagcaaaagagaggaatga
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