Citrus sinensis (Valencia orange): 102616133
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Entry
102616133 CDS
T02983
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102616133
Enzymes [BR:
cit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102616133
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
Pre-60S particles
Helicases
102616133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102616133
NCBI-ProteinID:
XP_006465537
LinkDB
All DBs
Position
7:join(9529853..9529965,9530056..9530290,9530408..9530662,9531174..9531328,9531845..9532022,9532807..9532994,9533203..9533407,9534177..9534282,9534813..9534925)
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AA seq
515 aa
AA seq
DB search
MEEAKKKSVPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ
ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV
FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP
GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL
PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR
YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI
KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI
HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSAL
DKLKETVESEAHRKHTIGFKLSRMGKGRVTGHAKQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaaagaagaagagcgtgccagtcttgccgtggatgcgaagcccggttgat
gtcagtctctttgaagactgtcctcttgatcacctcccttgtcttgaccccaggttgaag
gtggctttgcagaacatgggtatctcgtcactcttcccagtgcaagttgcagtttggcaa
gagacaataggccctggtctatttgaacgagacctttgcatcaattcacctacaggaagt
gggaaaactttgtcttatgctttgccaatagttcaaacattgtccaatcgtgctgttaga
tgtctacgtgctttggtggtgctgcccacgcgtgatctagctttgcaggtcaaggatgtt
ttcgctgcgattgcacctgcagtgggtttgtctgttggtttggctgtgggtcaatcttct
attgctgatgaaatttcggagcttattaagagacctaagctcgaggcaggaatctgttat
gaccctgaagatgttttgcaagagttacagagtgcagtagatatattggtggcaactcca
ggaaggctaatggaccatatcaatgctactaggggatttaccctcgagcatctctgttac
cttgttgttgacgaaactgatcgattgcttagggaggcatatcaggcttggctgcccact
gtgctccaattaactcgatctgataatgaaaaccgcttttctgatgcaagtacttttctg
ccttcagcatttggctctttaaaaaccataagaagatgtggtgttgaaaggggctttaag
gacaaaccttatcctaggcttgtgaagatggttttatctgccacgttaacccaagatcca
aataagctcgctcagcttgatctgcatcaccctttattcctgaccactggggaaactcgt
tataagctcccagaaagattggagtcctacaaactgatttgtgagtcgaagctgaagccc
ttgtatttggttgcacttcttcaaagtttaggagaggagaaatgtattgtcttcacatca
tctgtggagtcaactcaccgtctctgtacactactgaaccattttggtgaattgagaata
aagataaaggagtattcaggtcttcaacgacaatctgtaagaagcaagacgttgaaggca
tttcgggaagggaagatacaagtgcttgtttcctcagatgcaatgactcgcgggatggat
gttgaaggggtgaacaatgtcgttaattatgataagcctgcatatatcaagacatatatt
catcgtgctggccgaactgcaagagctggccagcttgggcgttgcttcactttgttgcat
aaggatgaggtgaagcgtttcaagaagctgttacagaaagctgacaatgactcctgtccc
attcactctatcccttccagtttgattgagtcactccgtccagtttataaatctgctcta
gacaagttaaaagagacagttgaatcagaagcgcacagaaagcacacaattgggttcaag
ctatcaagaatgggcaaaggcagagtaacaggccatgcaaagcagtaa
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