Citrus sinensis (Valencia orange): 102616261
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Entry
102616261 CDS
T02983
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00900
Terpenoid backbone biosynthesis
cit01100
Metabolic pathways
cit01110
Biosynthesis of secondary metabolites
Module
cit_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102616261
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cit01006
]
102616261
Enzymes [BR:
cit01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
102616261
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
102616261
2.5.1.29 geranylgeranyl diphosphate synthase
102616261
Prenyltransferases [BR:
cit01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
102616261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
ORF6C
Motif
Other DBs
NCBI-GeneID:
102616261
NCBI-ProteinID:
XP_006471033
LinkDB
All DBs
Position
5:complement(7774342..7775442)
Genome browser
AA seq
366 aa
AA seq
DB search
MSLILPPSSVSMASSELYRNSINAHKHQSMIAFDHAKHVTNSHPAKSILMGRQPKKLKII
NSQRNDTLPRLFQVDEYKALKAKQINKALDEAVPLRHPAILHEAMRYSLIPGGKRFMSTL
CIASCELVGGSESVAMSLACAIEMLSTMGTIQDDLPCFDNDDLRRGKPSNHKVFGEATTI
LACQALHCLAVEQIAMMKTKNVSPDRLLRAIVEMSSAIGSEGLAAGQIMDISSEGKDVSL
SELNFIHRHKSEKFVEASIVSGVIIGGGNEEEIERMRNYGKCVGMAYQLWNDIVDVIGSP
ETKETTGRDMLRGKATYPKLVGIDESKNYAKELLAKAKQELAYFDPAKAAPLDHLVNFMV
SFDNVN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaatccttcccccaagctccgtatccatggcctcatcagagctctataggaac
tccattaatgctcacaaacaccagtcaatgatcgcatttgaccacgctaaacatgttacc
aattcccaccctgcaaaatcaatactgatggggcgccaacccaaaaaactgaagatcatt
aattcacaacgaaacgacactttgcctaggttattccaagttgacgaatacaaggccttg
aaagcaaagcaaatcaacaaggctttagatgaagcagttccactgcgacatcctgctatt
cttcatgaagcaatgagatactctctgatacctggtggtaaacgttttatgtcaacttta
tgcattgcttcatgcgagctggttggtggaagtgagtcagtggcgatgtcactggcttgt
gctattgagatgctttccacaatgggtacgattcaagatgacctgccttgctttgacaac
gatgatcttcgacgaggcaagccttcaaaccacaaggttttcggtgaagcaaccacaatt
cttgcttgtcaagctctgcactgccttgctgttgagcaaattgcaatgatgaagaccaaa
aacgtttcgcctgaccgccttcttcgagccattgttgagatgagctcagcaattgggtca
gaaggacttgctgcagggcagatcatggacatcagcagtgaaggcaaagacgtaagtttg
agtgaattgaacttcatccatagacacaaatccgagaaatttgtagaggcaagcatagtt
agtggagtcataataggaggaggaaatgaagaagagatagagagaatgaggaactatgga
aaatgtgtagggatggcatatcaattgtggaatgatattgtagatgtgattggatcgcca
gagacgaaggaaacaactggtagggatatgctgcgaggtaaagcaacgtatccaaagttg
gtggggattgacgagtccaaaaattatgccaaggagcttctagcaaaagcaaaacaagag
cttgcttactttgatcctgcaaaagctgccccactagaccatctggttaacttcatggtt
tcttttgacaatgttaattag
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